Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC12P31275 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HOXC12P31275 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 RNU6-251P-201ENST00000363235 104 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 YWHAZP6-201ENST00000399764 738 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 RPS24P12-201ENST00000402084 394 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 HMGN1P14-201ENST00000412459 517 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC12P31275 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 DPPA2P1-201ENST00000428060 556 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 ZYG11AP1-201ENST00000430329 837 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC110602.1-201ENST00000437414 318 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.75□□□□□ -1.49
HOXC12P31275 TRIM60P16-201ENST00000444048 694 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 MORF4-201ENST00000447135 971 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 RN7SL552P-201ENST00000462094 276 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 MTND6P6-201ENST00000478031 263 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC099521.1-201ENST00000482557 334 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 UBA52P3-201ENST00000491303 382 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC023818.1-201ENST00000498379 384 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC093815.1-201ENST00000508637 280 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 ST13P12-201ENST00000508958 1094 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AC090502.2-201ENST00000549267 280 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AC023968.1-201ENST00000560719 475 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC092325.1-201ENST00000566449 554 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 ELOCP28-201ENST00000590044 317 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AL953862.2-201ENST00000603089 820 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AL022154.1-201ENST00000604698 785 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.75□□□□□ -1.49
HOXC12P31275 AL359535.1-201ENST00000612100 1087 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 AC099654.13-201ENST00000639774 207 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.75□□□□□ -1.49
HOXC12P31275 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HOXC12P31275 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HOXC12P31275 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 CASC19-204ENST00000641001 2055 ntBASIC5.75□□□□□ -1.49
HOXC12P31275 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
HOXC12P31275 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.74□□□□□ -1.49
HOXC12P31275 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC12P31275 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
HOXC12P31275 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 AC016716.1-201ENST00000265882 708 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 SNRPEP3-201ENST00000338402 276 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 RNA5SP350-201ENST00000363298 111 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 RN7SKP275-201ENST00000364626 301 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HOXC12P31275 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 RPS3AP23-201ENST00000401762 784 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 RNU2-65P-201ENST00000410162 185 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AL713922.1-201ENST00000416477 747 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC12P31275 USP9YP13-201ENST00000417797 480 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AIMP1P1-201ENST00000418670 937 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 AC007394.1-201ENST00000421941 531 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AC233981.1-201ENST00000423224 461 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC12P31275 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC12P31275 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.74□□□□□ -1.49
HOXC12P31275 RPS29P14-201ENST00000431518 171 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 PPIAP13-201ENST00000434706 478 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AP000936.3-201ENST00000438127 255 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 DNAJC19P4-201ENST00000440115 345 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC12P31275 AC244505.5-201ENST00000443639 207 ntBASIC5.74□□□□□ -1.49
HOXC12P31275 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.74□□□□□ -1.49
HOXC12P31275 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HOXC12P31275 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.74□□□□□ -1.49
HOXC12P31275 RPL23AP15-201ENST00000450202 459 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms