Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL356276.2-201ENST00000435919 558 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP1P30622 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.8□□□□□ -1.32
CLIP1P30622 ABCF2P2-201ENST00000450549 296 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 SNORA84-201ENST00000459229 133 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 AC108145.1-201ENST00000503770 153 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP1P30622 TVP23BP1-201ENST00000557500 617 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 AC124068.1-201ENST00000563131 678 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 AC022916.3-201ENST00000592961 742 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 AC008785.1-201ENST00000624475 456 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.8□□□□□ -1.32
CLIP1P30622 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.8□□□□□ -1.32
CLIP1P30622 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CLIP1P30622 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.79□□□□□ -1.32
CLIP1P30622 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP1P30622 AL389915.1-201ENST00000422463 466 ntBASIC6.79□□□□□ -1.32
CLIP1P30622 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.79□□□□□ -1.32
CLIP1P30622 RPL21P89-201ENST00000444021 467 ntBASIC6.79□□□□□ -1.32
CLIP1P30622 RPL23AP81-201ENST00000455252 467 ntBASIC6.79□□□□□ -1.32
CLIP1P30622 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP1P30622 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.79□□□□□ -1.32
CLIP1P30622 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.79□□□□□ -1.32
CLIP1P30622 OR8B1P-202ENST00000641132 1178 ntBASIC6.79□□□□□ -1.32
CLIP1P30622 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CLIP1P30622 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
CLIP1P30622 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP1P30622 RN7SKP186-201ENST00000365371 303 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 MT-RNR1-201ENST00000389680 954 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 SNORD66.1-201ENST00000391230 76 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 AC006326.1-201ENST00000445465 787 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 RPL23AP65-201ENST00000475608 468 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP1P30622 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.78□□□□□ -1.32
CLIP1P30622 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC6.78□□□□□ -1.32
CLIP1P30622 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.78□□□□□ -1.32
CLIP1P30622 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
CLIP1P30622 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP1P30622 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP1P30622 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP1P30622 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CLIP1P30622 AP001642.1-201ENST00000624727 2117 ntBASIC6.77□□□□□ -1.32
CLIP1P30622 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.77□□□□□ -1.32
CLIP1P30622 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CLIP1P30622 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.77□□□□□ -1.33
CLIP1P30622 AC009237.10-201ENST00000414112 510 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 AC004448.2-201ENST00000422360 586 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 YY1P1-201ENST00000427625 668 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 CEACAMP1-201ENST00000434624 1035 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
CLIP1P30622 SAP18P1-201ENST00000512058 390 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.77□□□□□ -1.33
CLIP1P30622 RN7SL703P-201ENST00000578485 302 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 CCDC58P3-201ENST00000590792 430 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 MIR6867-201ENST00000610636 67 ntBASIC6.77□□□□□ -1.33
CLIP1P30622 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.77□□□□□ -1.33
CLIP1P30622 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.77□□□□□ -1.33
CLIP1P30622 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CLIP1P30622 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP1P30622 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP1P30622 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CLIP1P30622 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CLIP1P30622 RNA5SP283-201ENST00000365604 119 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.76□□□□□ -1.33
CLIP1P30622 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.76□□□□□ -1.33
CLIP1P30622 AP002812.1-201ENST00000495378 474 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.76□□□□□ -1.33
CLIP1P30622 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AGGF1P6-201ENST00000569213 976 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 MIR4429-201ENST00000580105 73 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.76□□□□□ -1.33
CLIP1P30622 BNIP3P22-201ENST00000593399 556 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 AL122126.1-201ENST00000546905 1318 ntBASIC6.76□□□□□ -1.33
CLIP1P30622 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.76□□□□□ -1.33
CLIP1P30622 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
CLIP1P30622 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CLIP1P30622 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms