Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
GDF1P27539 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 CASC19-206ENST00000641028 1430 ntBASIC4.22□□□□□ -1.73
GDF1P27539 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 AC120338.1-201ENST00000625074 1541 ntBASIC4.22□□□□□ -1.73
GDF1P27539 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 CASC19-204ENST00000641001 2055 ntBASIC4.22□□□□□ -1.73
GDF1P27539 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
GDF1P27539 FAR2P2-201ENST00000413041 594 ntBASIC4.22□□□□□ -1.73
GDF1P27539 SEPT7P8-201ENST00000413308 775 ntBASIC4.22□□□□□ -1.73
GDF1P27539 TMBIM7P-201ENST00000418074 855 ntBASIC4.22□□□□□ -1.73
GDF1P27539 UQCRBP1-201ENST00000421129 336 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AL590609.2-201ENST00000421430 368 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC006065.1-201ENST00000422539 802 ntBASIC4.22□□□□□ -1.73
GDF1P27539 FAR2P4-202ENST00000425399 584 ntBASIC4.22□□□□□ -1.73
GDF1P27539 MTCO1P45-201ENST00000431457 267 ntBASIC4.22□□□□□ -1.73
GDF1P27539 HMGB3P10-201ENST00000434734 572 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AL590762.3-201ENST00000436372 640 ntBASIC4.22□□□□□ -1.73
GDF1P27539 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 MTND4P15-201ENST00000437913 1033 ntBASIC4.22□□□□□ -1.73
GDF1P27539 GTF3AP5-201ENST00000442645 697 ntBASIC4.22□□□□□ -1.73
GDF1P27539 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.22□□□□□ -1.73
GDF1P27539 RNA5SP103-201ENST00000459503 118 ntBASIC4.22□□□□□ -1.73
GDF1P27539 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 OR52A4P-201ENST00000472867 958 ntBASIC4.22□□□□□ -1.73
GDF1P27539 RN7SL481P-201ENST00000477764 299 ntBASIC4.22□□□□□ -1.73
GDF1P27539 RN7SL809P-201ENST00000482040 297 ntBASIC4.22□□□□□ -1.73
GDF1P27539 RWDD4P1-201ENST00000488019 565 ntBASIC4.22□□□□□ -1.73
GDF1P27539 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 MTND4LP2-201ENST00000502312 285 ntBASIC4.22□□□□□ -1.73
GDF1P27539 RNU6-491P-201ENST00000516099 110 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 OR8K2P-201ENST00000524645 927 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AP001781.1-201ENST00000530977 207 ntBASIC4.22□□□□□ -1.73
GDF1P27539 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 AL121839.1-201ENST00000556233 1185 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.22□□□□□ -1.73
GDF1P27539 AC209154.1-201ENST00000582156 337 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 AF230666.2-201ENST00000602328 725 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC068790.4-201ENST00000602474 263 ntBASIC4.22□□□□□ -1.73
GDF1P27539 RPL21P136-201ENST00000605378 396 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC131238.1-201ENST00000617135 328 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC015914.2-201ENST00000618167 288 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 AC015804.1-201ENST00000622935 435 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AC106730.3-201ENST00000624568 641 ntBASIC4.22□□□□□ -1.73
GDF1P27539 AP003400.6-201ENST00000624698 740 ntBASIC4.22□□□□□ -1.73
GDF1P27539 MIR7641-1-201ENST00000627518 61 ntBASIC4.22□□□□□ -1.73
GDF1P27539 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.22□□□□□ -1.73
GDF1P27539 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 MFSD8-216ENST00000641147 4009 ntBASIC4.22□□□□□ -1.73
GDF1P27539 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 AC024341.1-201ENST00000526444 1552 ntBASIC4.22□□□□□ -1.73
GDF1P27539 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
GDF1P27539 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.22□□□□□ -1.73
GDF1P27539 AC005332.5-201ENST00000591222 2919 ntBASIC4.22□□□□□ -1.73
GDF1P27539 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
GDF1P27539 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
GDF1P27539 AC139713.2-215ENST00000641428 5037 ntBASIC4.21□□□□□ -1.73
GDF1P27539 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
GDF1P27539 KARSP3-201ENST00000571212 1504 ntBASIC4.21□□□□□ -1.73
GDF1P27539 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.21□□□□□ -1.73
GDF1P27539 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
GDF1P27539 OR51H2P-202ENST00000641424 3046 ntBASIC4.21□□□□□ -1.74
GDF1P27539 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 AC008549.2-201ENST00000333482 706 ntBASIC4.21□□□□□ -1.74
GDF1P27539 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.21□□□□□ -1.74
GDF1P27539 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
GDF1P27539 UBBP2-201ENST00000376781 231 ntBASIC4.21□□□□□ -1.74
GDF1P27539 ARL4AP5-201ENST00000404372 599 ntBASIC4.21□□□□□ -1.74
GDF1P27539 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
GDF1P27539 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.21□□□□□ -1.74
GDF1P27539 AL357078.2-201ENST00000416486 427 ntBASIC4.21□□□□□ -1.74
GDF1P27539 CKS1BP6-201ENST00000424932 240 ntBASIC4.21□□□□□ -1.74
GDF1P27539 AL390879.2-203ENST00000426943 1121 ntBASIC4.21□□□□□ -1.74
GDF1P27539 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.21□□□□□ -1.74
GDF1P27539 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.21□□□□□ -1.74
GDF1P27539 Z99127.2-201ENST00000441426 334 ntBASIC4.21□□□□□ -1.74
GDF1P27539 HMGB3P9-201ENST00000441799 583 ntBASIC4.21□□□□□ -1.74
GDF1P27539 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.21□□□□□ -1.74
GDF1P27539 BTF3P6-201ENST00000448054 499 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms