Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 AC015871.2-201ENST00000603605 948 ntBASIC5.33□□□□□ -1.56
CD40P25942 ELOCP34-201ENST00000604436 327 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 AL365181.4-201ENST00000609800 547 ntBASIC5.33□□□□□ -1.56
CD40P25942 AP000894.4-201ENST00000610185 483 ntBASIC5.33□□□□□ -1.56
CD40P25942 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL352984.2-202ENST00000613699 155 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL357080.1-201ENST00000617394 239 ntBASIC5.33□□□□□ -1.56
CD40P25942 AC245014.3-201ENST00000618589 347 ntBASIC5.33□□□□□ -1.56
CD40P25942 TCL6_3.1-201ENST00000619064 137 ntBASIC5.33□□□□□ -1.56
CD40P25942 AL162377.2-201ENST00000624532 337 ntBASIC5.33□□□□□ -1.56
CD40P25942 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
CD40P25942 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 AC022325.1-201ENST00000502748 2199 ntBASIC5.33□□□□□ -1.56
CD40P25942 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 AC034229.2-201ENST00000566945 2508 ntBASIC5.33□□□□□ -1.56
CD40P25942 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CD40P25942 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.33□□□□□ -1.56
CD40P25942 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CD40P25942 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 TEX21P-201ENST00000447107 1476 ntBASIC5.32□□□□□ -1.56
CD40P25942 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.32□□□□□ -1.56
CD40P25942 RBMY1HP-201ENST00000382759 1389 ntBASIC5.32□□□□□ -1.56
CD40P25942 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD40P25942 AC008627.1-201ENST00000517511 1704 ntBASIC5.32□□□□□ -1.56
CD40P25942 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD40P25942 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.32□□□□□ -1.56
CD40P25942 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 RNU6-984P-201ENST00000363236 109 ntBASIC5.32□□□□□ -1.56
CD40P25942 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 RNU6-1042P-201ENST00000384204 107 ntBASIC5.32□□□□□ -1.56
CD40P25942 RNU6-348P-201ENST00000384386 107 ntBASIC5.32□□□□□ -1.56
CD40P25942 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 AC245096.1-201ENST00000413104 546 ntBASIC5.32□□□□□ -1.56
CD40P25942 MTCYBP5-201ENST00000423752 1135 ntBASIC5.32□□□□□ -1.56
CD40P25942 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 TRIM60P16-201ENST00000444048 694 ntBASIC5.32□□□□□ -1.56
CD40P25942 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 OR9M1P-201ENST00000459641 921 ntBASIC5.32□□□□□ -1.56
CD40P25942 MEMO1P3-201ENST00000459811 302 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC097493.1-201ENST00000463958 372 ntBASIC5.32□□□□□ -1.56
CD40P25942 AP000797.1-201ENST00000478870 387 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC096751.1-202ENST00000502691 1067 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 AC025458.1-201ENST00000506046 166 ntBASIC5.32□□□□□ -1.56
CD40P25942 MTND2P33-201ENST00000506452 1031 ntBASIC5.32□□□□□ -1.56
CD40P25942 GTF2F2P1-201ENST00000511083 675 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC026412.2-201ENST00000512270 1075 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC006499.2-201ENST00000513470 337 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 TRIM77BP-201ENST00000524985 1119 ntBASIC5.32□□□□□ -1.56
CD40P25942 OR6M2P-201ENST00000529831 871 ntBASIC5.32□□□□□ -1.56
CD40P25942 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CD40P25942 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 AC007956.1-201ENST00000555623 542 ntBASIC5.32□□□□□ -1.56
CD40P25942 RPA2P1-201ENST00000556557 721 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 AC018558.5-201ENST00000565840 952 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 AC141257.3-201ENST00000572906 215 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.32□□□□□ -1.56
CD40P25942 NPIPB1P-202ENST00000588786 828 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC067852.5-201ENST00000589299 310 ntBASIC5.32□□□□□ -1.56
CD40P25942 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 RBM11P1-201ENST00000604951 799 ntBASIC5.32□□□□□ -1.56
CD40P25942 HSPE1P14-201ENST00000605812 302 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC015982.1-201ENST00000608113 465 ntBASIC5.32□□□□□ -1.56
CD40P25942 AL096712.1-201ENST00000614561 159 ntBASIC5.32□□□□□ -1.56
CD40P25942 AC129778.1-202ENST00000623812 261 ntBASIC5.32□□□□□ -1.56
CD40P25942 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 AC073488.3-201ENST00000631611 778 ntBASIC5.32□□□□□ -1.56
CD40P25942 AL591379.1-207ENST00000635982 261 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms