Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AP003467.2-201ENST00000520175 319 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AP001893.2-201ENST00000526949 202 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.2□□□□□ -1.26
RFX1P22670 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 AC097467.4-201ENST00000605504 141 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC078899.5-201ENST00000612475 178 ntBASIC7.2□□□□□ -1.26
RFX1P22670 UBE2Q2P2-203ENST00000613592 761 ntBASIC7.2□□□□□ -1.26
RFX1P22670 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 MIR1910-201ENST00000636955 80 ntBASIC7.2□□□□□ -1.26
RFX1P22670 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.2□□□□□ -1.26
RFX1P22670 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.2□□□□□ -1.26
RFX1P22670 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RFX1P22670 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RFX1P22670 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 OR4K15-201ENST00000305051 1216 ntBASIC7.19□□□□□ -1.26
RFX1P22670 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RFX1P22670 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 RNU6-761P-201ENST00000384148 107 ntBASIC7.19□□□□□ -1.26
RFX1P22670 RNU1-46P-201ENST00000384425 164 ntBASIC7.19□□□□□ -1.26
RFX1P22670 PRRC2CP1-201ENST00000404428 159 ntBASIC7.19□□□□□ -1.26
RFX1P22670 RN7SKP161-201ENST00000411110 305 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AL139413.1-201ENST00000421309 217 ntBASIC7.19□□□□□ -1.26
RFX1P22670 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 AC127526.2-201ENST00000426436 775 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 RPL37P1-201ENST00000432310 284 ntBASIC7.19□□□□□ -1.26
RFX1P22670 PSMD10P2-201ENST00000432890 672 ntBASIC7.19□□□□□ -1.26
RFX1P22670 BTF3P10-201ENST00000433415 495 ntBASIC7.19□□□□□ -1.26
RFX1P22670 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 RGS5-217ENST00000451759 835 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.19□□□□□ -1.26
RFX1P22670 RPL21P5-201ENST00000554662 472 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.19□□□□□ -1.26
RFX1P22670 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 MIR4675-201ENST00000577898 77 ntBASIC7.19□□□□□ -1.26
RFX1P22670 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.19□□□□□ -1.26
RFX1P22670 SUGT1P3-202ENST00000604259 383 ntBASIC7.19□□□□□ -1.26
RFX1P22670 BCRP9-201ENST00000605312 388 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AC016727.1-205ENST00000605437 569 ntBASIC7.19□□□□□ -1.26
RFX1P22670 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.19□□□□□ -1.26
RFX1P22670 AL355816.1-201ENST00000607951 118 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AL590282.1-201ENST00000610379 1136 ntBASIC7.19□□□□□ -1.26
RFX1P22670 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 PISRT1-201ENST00000626175 531 ntBASIC7.19□□□□□ -1.26
RFX1P22670 AL596275.2-208ENST00000641192 594 ntBASIC7.19□□□□□ -1.26
RFX1P22670 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RFX1P22670 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RFX1P22670 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
RFX1P22670 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.19□□□□□ -1.26
RFX1P22670 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RFX1P22670 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 AL606537.1-201ENST00000607258 2011 ntBASIC7.18□□□□□ -1.26
RFX1P22670 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX1P22670 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 DOCK11P1-201ENST00000553480 5932 ntBASIC7.18□□□□□ -1.26
RFX1P22670 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 Y_RNA.11-201ENST00000362375 109 ntBASIC7.18□□□□□ -1.26
RFX1P22670 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 RNU6-769P-201ENST00000384407 104 ntBASIC7.18□□□□□ -1.26
RFX1P22670 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RFX1P22670 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 CYCSP52-201ENST00000422857 310 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AL451136.1-201ENST00000435399 325 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC128677.1-201ENST00000436016 442 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms