Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A1P20908 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.21□□□□□ -1.74
COL5A1P20908 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 RNU1-20P-201ENST00000363314 162 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 FCF1P5-201ENST00000406490 482 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 RPL6P29-201ENST00000414863 865 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC117434.1-201ENST00000419971 836 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 COX6B1P7-201ENST00000430845 235 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AL133547.1-201ENST00000448546 220 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AL445433.1-201ENST00000457507 257 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 RPL7P15-201ENST00000461190 712 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC091564.1-201ENST00000464563 479 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC087477.6-201ENST00000559595 843 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC025175.1-201ENST00000606482 759 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 AL353726.1-201ENST00000614041 1000 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC007546.1-201ENST00000619452 559 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL5A1P20908 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AL355852.1-201ENST00000454081 1771 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
COL5A1P20908 AC068870.3-201ENST00000625077 2536 ntBASIC4.21□□□□□ -1.74
COL5A1P20908 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
COL5A1P20908 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A1P20908 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.2□□□□□ -1.74
COL5A1P20908 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
COL5A1P20908 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL5A1P20908 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 AL079305.1-201ENST00000623159 3008 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A1P20908 AL590806.1-201ENST00000415818 853 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 HMGB3P5-201ENST00000428894 612 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 RPS4XP18-201ENST00000495480 763 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 USP9YP2-201ENST00000504503 1000 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 USP9YP1-201ENST00000513521 1002 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.2□□□□□ -1.74
COL5A1P20908 RNU6-513P-201ENST00000516104 104 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.2□□□□□ -1.74
COL5A1P20908 AP002360.3-201ENST00000607673 710 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 AC097505.1-201ENST00000610199 565 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 AC018816.2-201ENST00000621460 353 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.2□□□□□ -1.74
COL5A1P20908 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL5A1P20908 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 AC004656.1-201ENST00000568479 4951 ntBASIC4.2□□□□□ -1.74
COL5A1P20908 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL5A1P20908 AC006484.1-201ENST00000435086 1884 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A1P20908 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC139769.1-204ENST00000472297 1931 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 RNA5SP124-201ENST00000362739 110 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 RNU1-83P-201ENST00000363426 164 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AC108032.1-201ENST00000416706 207 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 MFSD13B-201ENST00000420133 1290 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 MTCO1P54-201ENST00000430139 712 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC004938.1-201ENST00000438468 308 ntBASIC4.19□□□□□ -1.74
COL5A1P20908 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.19□□□□□ -1.74
COL5A1P20908 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL5A1P20908 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC4.19□□□□□ -1.74
COL5A1P20908 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.19□□□□□ -1.74
COL5A1P20908 AC112206.1-201ENST00000468416 477 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms