Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 RN7SL435P-201ENST00000584418 282 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDGFRAP16234 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 AC092079.1-201ENST00000558620 1985 ntBASIC5□□□□□ -1.61
PDGFRAP16234 SDAD1P1-202ENST00000524156 2051 ntBASIC5□□□□□ -1.61
PDGFRAP16234 BX005019.1-201ENST00000561881 1810 ntBASIC5□□□□□ -1.61
PDGFRAP16234 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 AL445487.1-201ENST00000415694 1580 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDGFRAP16234 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDGFRAP16234 RPS27AP11-201ENST00000402798 447 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 RPL36AP10-201ENST00000421785 322 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 RPS26P47-201ENST00000427219 348 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AL160175.1-201ENST00000428124 247 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 MTCO3P21-201ENST00000430791 643 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 RPL7AP52-201ENST00000458096 790 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFRAP16234 AC091868.1-201ENST00000508746 304 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 RNU1-6P-201ENST00000516290 144 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFRAP16234 AP001880.2-201ENST00000538233 448 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC008083.2-201ENST00000546707 476 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFRAP16234 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.99□□□□□ -1.61
PDGFRAP16234 UBE2FP2-201ENST00000566646 462 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC233266.2-201ENST00000567067 528 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 MIR4700-201ENST00000578311 74 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC233702.9-201ENST00000581528 203 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC135178.6-201ENST00000605314 398 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC011472.4-201ENST00000615848 491 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 MIR8069-1-201ENST00000616627 86 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 MIR8069-2-201ENST00000621412 86 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 CASC19-204ENST00000641001 2055 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
PDGFRAP16234 MAPK10-263ENST00000641052 4307 ntBASIC4.99□□□□□ -1.61
PDGFRAP16234 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFRAP16234 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFRAP16234 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFRAP16234 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFRAP16234 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 RAD1P1-201ENST00000231383 813 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDGFRAP16234 RNU1-82P-201ENST00000390851 165 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFRAP16234 AL592291.1-201ENST00000403830 352 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 ARL4AP5-201ENST00000404372 599 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 AL353692.2-201ENST00000407054 335 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 RNU4-74P-201ENST00000411280 161 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 USP9YP19-201ENST00000412165 485 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFRAP16234 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 USP9YP9-201ENST00000429406 715 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AL513321.1-201ENST00000441175 761 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFRAP16234 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFRAP16234 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFRAP16234 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AL390726.5-202ENST00000564800 256 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 CBX3P2-202ENST00000583365 535 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AL450270.1-201ENST00000606160 391 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 AC073342.3-201ENST00000624211 193 ntBASIC4.98□□□□□ -1.61
PDGFRAP16234 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFRAP16234 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms