Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 RNA5SP509-201ENST00000364577 119 ntBASIC3.59□□□□□ -1.83
CD28P10747 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 RPL5P19-201ENST00000404228 893 ntBASIC3.59□□□□□ -1.83
CD28P10747 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CD28P10747 RN7SKP247-201ENST00000411094 308 ntBASIC3.59□□□□□ -1.83
CD28P10747 EIF4A1P1-201ENST00000420241 934 ntBASIC3.59□□□□□ -1.83
CD28P10747 GAPDHP49-201ENST00000421421 961 ntBASIC3.59□□□□□ -1.83
CD28P10747 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 RPS12P10-201ENST00000427031 377 ntBASIC3.59□□□□□ -1.83
CD28P10747 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 AC023141.6-201ENST00000429418 337 ntBASIC3.59□□□□□ -1.83
CD28P10747 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 NDUFA5P1-201ENST00000433858 341 ntBASIC3.59□□□□□ -1.83
CD28P10747 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 YWHAZP2-201ENST00000440317 728 ntBASIC3.59□□□□□ -1.83
CD28P10747 BTF3P6-201ENST00000448054 499 ntBASIC3.59□□□□□ -1.83
CD28P10747 RPL23AP24-201ENST00000458203 385 ntBASIC3.59□□□□□ -1.83
CD28P10747 PPIAP21-201ENST00000464473 501 ntBASIC3.59□□□□□ -1.83
CD28P10747 AC112206.1-201ENST00000468416 477 ntBASIC3.59□□□□□ -1.83
CD28P10747 STRADBP1-201ENST00000478954 1281 ntBASIC3.59□□□□□ -1.83
CD28P10747 AL161747.1-201ENST00000480068 358 ntBASIC3.59□□□□□ -1.83
CD28P10747 AC098799.3-201ENST00000506095 438 ntBASIC3.59□□□□□ -1.83
CD28P10747 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CD28P10747 AC106806.2-201ENST00000509365 500 ntBASIC3.59□□□□□ -1.83
CD28P10747 AC015795.1-201ENST00000513669 327 ntBASIC3.59□□□□□ -1.83
CD28P10747 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.59□□□□□ -1.83
CD28P10747 AC012409.3-201ENST00000611343 981 ntBASIC3.59□□□□□ -1.83
CD28P10747 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.59□□□□□ -1.83
CD28P10747 MIR8069-1-201ENST00000616627 86 ntBASIC3.59□□□□□ -1.83
CD28P10747 AL121890.3-201ENST00000618494 516 ntBASIC3.59□□□□□ -1.83
CD28P10747 MIR8069-2-201ENST00000621412 86 ntBASIC3.59□□□□□ -1.83
CD28P10747 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.59□□□□□ -1.83
CD28P10747 AL121950.1-201ENST00000624993 2077 ntBASIC3.59□□□□□ -1.83
CD28P10747 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CD28P10747 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CD28P10747 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.59□□□□□ -1.84
CD28P10747 VPS35P1-201ENST00000563400 1518 ntBASIC3.59□□□□□ -1.84
CD28P10747 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.59□□□□□ -1.84
CD28P10747 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.59□□□□□ -1.84
CD28P10747 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CD28P10747 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 AC093775.1-201ENST00000624154 1868 ntBASIC3.58□□□□□ -1.84
CD28P10747 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CD28P10747 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.58□□□□□ -1.84
CD28P10747 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 UBBP2-201ENST00000376781 231 ntBASIC3.58□□□□□ -1.84
CD28P10747 MIR659-201ENST00000384963 97 ntBASIC3.58□□□□□ -1.84
CD28P10747 MT-RNR1-201ENST00000389680 954 ntBASIC3.58□□□□□ -1.84
CD28P10747 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CD28P10747 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.58□□□□□ -1.84
CD28P10747 RPL21P108-201ENST00000413857 481 ntBASIC3.58□□□□□ -1.84
CD28P10747 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 TMBIM7P-201ENST00000418074 855 ntBASIC3.58□□□□□ -1.84
CD28P10747 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 FTH1P16-201ENST00000435241 552 ntBASIC3.58□□□□□ -1.84
CD28P10747 AC004938.1-201ENST00000438468 308 ntBASIC3.58□□□□□ -1.84
CD28P10747 RPL23AP93-201ENST00000440847 484 ntBASIC3.58□□□□□ -1.84
CD28P10747 FHP1-201ENST00000442741 703 ntBASIC3.58□□□□□ -1.84
CD28P10747 FCF1P7-201ENST00000451185 558 ntBASIC3.58□□□□□ -1.84
CD28P10747 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 AC009963.2-201ENST00000453431 138 ntBASIC3.58□□□□□ -1.84
CD28P10747 AC010618.1-201ENST00000469924 477 ntBASIC3.58□□□□□ -1.84
CD28P10747 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.58□□□□□ -1.84
CD28P10747 AC025164.1-201ENST00000496249 478 ntBASIC3.58□□□□□ -1.84
CD28P10747 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.58□□□□□ -1.84
CD28P10747 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.58□□□□□ -1.84
CD28P10747 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 RNA5SP464-201ENST00000516251 108 ntBASIC3.58□□□□□ -1.84
CD28P10747 AC138701.1-201ENST00000524329 714 ntBASIC3.58□□□□□ -1.84
CD28P10747 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.58□□□□□ -1.84
CD28P10747 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.58□□□□□ -1.84
CD28P10747 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.58□□□□□ -1.84
CD28P10747 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.58□□□□□ -1.84
CD28P10747 AC122134.1-201ENST00000565664 1104 ntBASIC3.58□□□□□ -1.84
CD28P10747 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 MIR3939-201ENST00000582614 106 ntBASIC3.58□□□□□ -1.84
CD28P10747 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.58□□□□□ -1.84
CD28P10747 AC115286.1-201ENST00000604298 434 ntBASIC3.58□□□□□ -1.84
CD28P10747 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CD28P10747 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms