Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 A2MP1-204ENST00000566278 4130 ntBASIC5.22□□□□□ -1.57
RB1P06400 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.22□□□□□ -1.57
RB1P06400 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 AL592148.3-201ENST00000608771 2646 ntBASIC5.22□□□□□ -1.57
RB1P06400 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
RB1P06400 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 RPS27AP11-201ENST00000402798 447 ntBASIC5.22□□□□□ -1.57
RB1P06400 RNA5SP498-201ENST00000411342 120 ntBASIC5.22□□□□□ -1.57
RB1P06400 XKRYP4-201ENST00000414395 483 ntBASIC5.22□□□□□ -1.57
RB1P06400 RPL12P34-201ENST00000424532 479 ntBASIC5.22□□□□□ -1.57
RB1P06400 UBE2D3P3-201ENST00000426992 425 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC004975.1-201ENST00000428733 208 ntBASIC5.22□□□□□ -1.57
RB1P06400 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.22□□□□□ -1.57
RB1P06400 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 XKRYP5-201ENST00000449659 483 ntBASIC5.22□□□□□ -1.57
RB1P06400 NPM1P39-201ENST00000449818 867 ntBASIC5.22□□□□□ -1.57
RB1P06400 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 MTND2P28-201ENST00000457540 1044 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC015908.1-201ENST00000478739 476 ntBASIC5.22□□□□□ -1.57
RB1P06400 RFPL4AP5-201ENST00000514977 504 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC134698.5-201ENST00000519444 336 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.22□□□□□ -1.57
RB1P06400 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RB1P06400 UBTFL9-201ENST00000534504 1148 ntBASIC5.22□□□□□ -1.57
RB1P06400 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.22□□□□□ -1.57
RB1P06400 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.22□□□□□ -1.57
RB1P06400 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.22□□□□□ -1.57
RB1P06400 AC022726.1-201ENST00000587475 207 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC005034.4-201ENST00000603612 899 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC079880.2-201ENST00000603790 1213 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC005962.2-201ENST00000611427 652 ntBASIC5.22□□□□□ -1.57
RB1P06400 AL049794.2-201ENST00000616301 365 ntBASIC5.22□□□□□ -1.57
RB1P06400 AP004607.9-201ENST00000618202 316 ntBASIC5.22□□□□□ -1.57
RB1P06400 AL138960.2-201ENST00000625145 535 ntBASIC5.22□□□□□ -1.57
RB1P06400 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 OR56B2P-202ENST00000641377 2453 ntBASIC5.22□□□□□ -1.57
RB1P06400 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.22□□□□□ -1.57
RB1P06400 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RB1P06400 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RB1P06400 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RB1P06400 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RB1P06400 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
RB1P06400 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RB1P06400 BTBD10P1-201ENST00000549824 1352 ntBASIC5.21□□□□□ -1.58
RB1P06400 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 RNU4-44P-201ENST00000363050 141 ntBASIC5.21□□□□□ -1.58
RB1P06400 RNA5SP447-201ENST00000363749 119 ntBASIC5.21□□□□□ -1.58
RB1P06400 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RB1P06400 RNU4-31P-201ENST00000384211 141 ntBASIC5.21□□□□□ -1.58
RB1P06400 U3.30-201ENST00000391308 210 ntBASIC5.21□□□□□ -1.58
RB1P06400 RNA5SP397-201ENST00000391323 118 ntBASIC5.21□□□□□ -1.58
RB1P06400 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.21□□□□□ -1.58
RB1P06400 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.21□□□□□ -1.58
RB1P06400 AL732292.1-201ENST00000426692 226 ntBASIC5.21□□□□□ -1.58
RB1P06400 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 AC090804.1-201ENST00000448870 490 ntBASIC5.21□□□□□ -1.58
RB1P06400 HMGB1P26-201ENST00000452520 628 ntBASIC5.21□□□□□ -1.58
RB1P06400 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.21□□□□□ -1.58
RB1P06400 AC013356.1-201ENST00000489027 564 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC083829.1-201ENST00000503756 657 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC093840.1-201ENST00000511599 336 ntBASIC5.21□□□□□ -1.58
RB1P06400 RN7SKP141-201ENST00000516167 338 ntBASIC5.21□□□□□ -1.58
RB1P06400 RNA5SP392-201ENST00000516905 112 ntBASIC5.21□□□□□ -1.58
RB1P06400 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.21□□□□□ -1.58
RB1P06400 AC068993.1-201ENST00000546724 589 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.21□□□□□ -1.58
RB1P06400 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.21□□□□□ -1.58
RB1P06400 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RB1P06400 RPL12P25-202ENST00000598100 674 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.21□□□□□ -1.58
RB1P06400 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.21□□□□□ -1.58
RB1P06400 AC010424.2-201ENST00000607594 443 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC120053.1-201ENST00000607706 736 ntBASIC5.21□□□□□ -1.58
RB1P06400 AC011472.4-201ENST00000615848 491 ntBASIC5.21□□□□□ -1.58
RB1P06400 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms