Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 RPL35P6-201ENST00000490024 372 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AC093824.1-201ENST00000508796 343 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AP000859.1-201ENST00000525536 307 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AP001804.2-201ENST00000533932 910 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL161729.3-201ENST00000603533 673 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL356218.2-201ENST00000605264 187 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 FAM27D1-201ENST00000612308 341 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 SNX18P1Y-201ENST00000616231 511 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AC011944.2-201ENST00000624440 683 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL139254.3-201ENST00000641097 674 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 AC138627.1-204ENST00000641894 765 ntBASIC4.9□□□□□ -1.63
CTDNEP1O95476 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTDNEP1O95476 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTDNEP1O95476 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.9□□□□□ -1.63
CTDNEP1O95476 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CTDNEP1O95476 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC011503.2-201ENST00000594230 1500 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 RNA5SP509-201ENST00000364577 119 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AL161909.1-201ENST00000397390 712 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 RPL6P29-201ENST00000414863 865 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC011998.1-201ENST00000433403 117 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AL132765.1-201ENST00000434165 553 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC013410.1-201ENST00000436223 1232 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 CEACAMP9-201ENST00000442990 513 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 Z95152.1-201ENST00000453556 656 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC109327.1-201ENST00000471666 403 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 RPL5P22-201ENST00000480199 884 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AL592156.1-201ENST00000508758 304 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AL121890.3-201ENST00000618494 516 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC132825.8-201ENST00000640783 297 ntBASIC4.89□□□□□ -1.63
CTDNEP1O95476 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.89□□□□□ -1.63
CTDNEP1O95476 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTDNEP1O95476 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 MTCO1P15-201ENST00000529569 1526 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 P2RY10P2-201ENST00000416730 913 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 AC068287.1-201ENST00000430283 295 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 RPL7AP28-201ENST00000464513 571 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 RN7SL585P-201ENST00000470538 280 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 RPS29P19-201ENST00000479709 171 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 TTC39DP-201ENST00000416781 1688 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.88□□□□□ -1.63
CTDNEP1O95476 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.88□□□□□ -1.63
CTDNEP1O95476 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTDNEP1O95476 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CTDNEP1O95476 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms