Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHOX2O60902 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHOX2O60902 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SHOX2O60902 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 AC107021.2-201ENST00000567714 2095 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.47□□□□□ -1.69
SHOX2O60902 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 MIR550A3-201ENST00000390735 95 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 GLULP6-201ENST00000399502 913 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL589994.1-201ENST00000404962 340 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 MIR1911-201ENST00000410783 80 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL139128.1-201ENST00000413921 941 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.47□□□□□ -1.69
SHOX2O60902 AC073136.2-201ENST00000417282 849 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.47□□□□□ -1.69
SHOX2O60902 PA2G4P6-201ENST00000438325 1197 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 YWHAQP9-201ENST00000445891 512 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.47□□□□□ -1.69
SHOX2O60902 AL389915.2-201ENST00000454576 441 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.47□□□□□ -1.69
SHOX2O60902 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.47□□□□□ -1.69
SHOX2O60902 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.47□□□□□ -1.69
SHOX2O60902 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 DUX4L52-201ENST00000549363 777 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC133555.2-201ENST00000550213 292 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.47□□□□□ -1.69
SHOX2O60902 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.47□□□□□ -1.69
SHOX2O60902 MIR4691-201ENST00000583764 85 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC068020.1-201ENST00000594215 661 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 AL512329.2-201ENST00000607350 548 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 AC008115.4-201ENST00000619780 775 ntBASIC4.47□□□□□ -1.69
SHOX2O60902 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SHOX2O60902 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.47□□□□□ -1.69
SHOX2O60902 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHOX2O60902 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
SHOX2O60902 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.46□□□□□ -1.69
SHOX2O60902 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.46□□□□□ -1.7
SHOX2O60902 Z97832.1-201ENST00000402490 328 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 RN7SKP56-201ENST00000410513 331 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.46□□□□□ -1.7
SHOX2O60902 AC016397.1-201ENST00000412463 242 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 USP12PY-201ENST00000427677 1064 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 RPL12P3-201ENST00000440080 396 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 MTCYBP21-201ENST00000443300 1113 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 AC107015.1-201ENST00000466902 747 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 RN7SL319P-201ENST00000480656 221 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 RN7SL727P-201ENST00000482164 296 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 AC016687.1-201ENST00000482574 353 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.46□□□□□ -1.7
SHOX2O60902 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SHOX2O60902 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.46□□□□□ -1.7
SHOX2O60902 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.46□□□□□ -1.7
SHOX2O60902 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.46□□□□□ -1.7
SHOX2O60902 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.46□□□□□ -1.7
SHOX2O60902 MIR1269B-201ENST00000580405 75 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 OR7A19P-201ENST00000608051 733 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 MIR486-1-201ENST00000612171 68 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 AL158062.1-201ENST00000619632 745 ntBASIC4.46□□□□□ -1.7
SHOX2O60902 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SHOX2O60902 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHOX2O60902 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.46□□□□□ -1.7
SHOX2O60902 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SHOX2O60902 AL442639.1-201ENST00000625030 1899 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.45□□□□□ -1.7
SHOX2O60902 RLIMP2-201ENST00000427891 1563 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 LINC00622-201ENST00000562811 1570 ntBASIC4.45□□□□□ -1.7
SHOX2O60902 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SHOX2O60902 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms