Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU4-4P-201ENST00000364588 130 ntBASIC4.96□□□□□ -1.62
LDB2O43679 TAS2R15P-201ENST00000390674 928 ntBASIC4.96□□□□□ -1.62
LDB2O43679 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 AL034403.1-201ENST00000399414 885 ntBASIC4.96□□□□□ -1.62
LDB2O43679 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
LDB2O43679 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.96□□□□□ -1.62
LDB2O43679 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 AF186996.5-201ENST00000418098 904 ntBASIC4.96□□□□□ -1.62
LDB2O43679 RPA2P2-201ENST00000419698 796 ntBASIC4.96□□□□□ -1.62
LDB2O43679 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.96□□□□□ -1.62
LDB2O43679 RN7SL517P-201ENST00000462240 305 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 AC231760.1-201ENST00000498002 260 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC026414.1-201ENST00000504046 698 ntBASIC4.96□□□□□ -1.62
LDB2O43679 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 RNU6-311P-201ENST00000516224 102 ntBASIC4.96□□□□□ -1.62
LDB2O43679 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.96□□□□□ -1.62
LDB2O43679 RN7SKP147-201ENST00000517154 244 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC013701.1-201ENST00000522657 465 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 DUXAP5-201ENST00000529668 529 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AP003717.3-201ENST00000544832 1180 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.96□□□□□ -1.62
LDB2O43679 AC027455.1-201ENST00000574104 594 ntBASIC4.96□□□□□ -1.62
LDB2O43679 FAM106CP-201ENST00000582212 507 ntBASIC4.96□□□□□ -1.62
LDB2O43679 ELOCP35-201ENST00000604289 336 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC073387.2-201ENST00000604797 784 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC106052.1-201ENST00000608029 497 ntBASIC4.96□□□□□ -1.62
LDB2O43679 Z95327.3-201ENST00000610385 572 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC022079.2-201ENST00000619739 566 ntBASIC4.96□□□□□ -1.62
LDB2O43679 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.96□□□□□ -1.62
LDB2O43679 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.62
LDB2O43679 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LDB2O43679 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LDB2O43679 Z95331.1-201ENST00000623075 23112 ntBASIC4.96□□□□□ -1.62
LDB2O43679 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 LIPT1P1-201ENST00000415870 1186 ntBASIC4.95□□□□□ -1.62
LDB2O43679 MTND2P16-201ENST00000419987 799 ntBASIC4.95□□□□□ -1.62
LDB2O43679 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 AC093084.1-201ENST00000424233 687 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 PSMD10P3-201ENST00000437000 448 ntBASIC4.95□□□□□ -1.62
LDB2O43679 PA2G4P6-201ENST00000438325 1197 ntBASIC4.95□□□□□ -1.62
LDB2O43679 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.95□□□□□ -1.62
LDB2O43679 AL137845.2-201ENST00000444292 988 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 HMGB1P5-202ENST00000451497 985 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 AC008280.2-201ENST00000455473 307 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC010627.1-201ENST00000503819 1294 ntBASIC4.95□□□□□ -1.62
LDB2O43679 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 ENPP7P9-201ENST00000514456 627 ntBASIC4.95□□□□□ -1.62
LDB2O43679 RNA5SP392-201ENST00000516905 112 ntBASIC4.95□□□□□ -1.62
LDB2O43679 EIF4A2P5-201ENST00000529914 499 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC023538.1-201ENST00000534576 736 ntBASIC4.95□□□□□ -1.62
LDB2O43679 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.95□□□□□ -1.62
LDB2O43679 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 AL049830.4-201ENST00000555149 351 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC090888.2-201ENST00000559765 1144 ntBASIC4.95□□□□□ -1.62
LDB2O43679 OR1F2P-201ENST00000570470 933 ntBASIC4.95□□□□□ -1.62
LDB2O43679 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 Z99289.3-201ENST00000605586 594 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AL365400.2-201ENST00000605604 902 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC019131.2-201ENST00000609071 870 ntBASIC4.95□□□□□ -1.62
LDB2O43679 AC116651.1-201ENST00000609724 556 ntBASIC4.95□□□□□ -1.62
LDB2O43679 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.95□□□□□ -1.62
LDB2O43679 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.95□□□□□ -1.62
LDB2O43679 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.95□□□□□ -1.62
LDB2O43679 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.95□□□□□ -1.62
LDB2O43679 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.95□□□□□ -1.62
LDB2O43679 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
LDB2O43679 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms