Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 AP006245.2-201ENST00000522004 300 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 COX6B1P6-201ENST00000522347 255 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH17O14917 DUXAP5-201ENST00000529668 529 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH17O14917 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.18□□□□□ -1.58
PCDH17O14917 AC004825.1-201ENST00000555068 586 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 AP005262.1-201ENST00000582646 997 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDH17O14917 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PCDH17O14917 AC025588.2-201ENST00000604851 466 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AC016877.3-201ENST00000606778 504 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AL512329.2-201ENST00000607350 548 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 AC021755.4-201ENST00000616620 456 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 AP000484.1-201ENST00000620067 1252 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 CASC19-222ENST00000641321 1173 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 LINC02211-204ENST00000642024 1070 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 AC010329.2-201ENST00000595195 2737 ntBASIC5.18□□□□□ -1.58
PCDH17O14917 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCDH17O14917 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDH17O14917 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDH17O14917 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC079097.1-201ENST00000512187 1399 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 AC119751.3-201ENST00000399720 670 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 FCF1P5-201ENST00000406490 482 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 GSTM3P2-201ENST00000412746 530 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.17□□□□□ -1.58
PCDH17O14917 CYCSP12-201ENST00000437729 300 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 RPS26P30-201ENST00000443431 335 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 TPMTP4-201ENST00000450749 678 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 RPL23AP71-201ENST00000470966 469 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC005912.1-201ENST00000495392 255 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 BOLA3P3-201ENST00000505182 232 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 RNA5SP230-201ENST00000517039 122 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 HMGB1P23-201ENST00000518743 568 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC023538.1-201ENST00000534576 736 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 NIFKP8-201ENST00000560500 874 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC090695.1-201ENST00000561269 1222 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.17□□□□□ -1.58
PCDH17O14917 GAS5-AS1-201ENST00000602767 694 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 Z99289.3-201ENST00000605586 594 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AP000238.1-201ENST00000608759 426 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 Z99129.2-201ENST00000619967 314 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AP002967.1-201ENST00000624203 539 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.17□□□□□ -1.58
PCDH17O14917 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
PCDH17O14917 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 AC104260.2-201ENST00000623551 3497 ntBASIC5.17□□□□□ -1.58
PCDH17O14917 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PCDH17O14917 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.17□□□□□ -1.58
PCDH17O14917 MTND4P10-201ENST00000446199 1363 ntBASIC5.16□□□□□ -1.58
PCDH17O14917 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.16□□□□□ -1.58
PCDH17O14917 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PCDH17O14917 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH17O14917 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.16□□□□□ -1.58
PCDH17O14917 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.16□□□□□ -1.58
PCDH17O14917 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
PCDH17O14917 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH17O14917 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH17O14917 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PCDH17O14917 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms