Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AL391684.1-202ENST00000641293 1636 ntBASIC4.72□□□□□ -1.65
NEDD8-MDP1E9PL57 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD8-MDP1E9PL57 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NEDD8-MDP1E9PL57 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.71□□□□□ -1.65
NEDD8-MDP1E9PL57 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.71□□□□□ -1.65
NEDD8-MDP1E9PL57 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD8-MDP1E9PL57 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
NEDD8-MDP1E9PL57 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
NEDD8-MDP1E9PL57 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC068538.1-201ENST00000376856 336 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TMBIM7P-201ENST00000418074 855 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC004690.1-201ENST00000418216 328 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 Z99127.2-201ENST00000441426 334 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 BTF3P6-201ENST00000448054 499 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC011276.1-201ENST00000469688 323 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC025181.1-201ENST00000477507 416 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC098583.1-201ENST00000480875 255 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 RNU6-491P-201ENST00000516099 110 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC068831.4-201ENST00000556118 109 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AL731537.2-201ENST00000561565 951 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC012557.1-201ENST00000607115 611 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 MLECP1-201ENST00000615893 709 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC006338.2-201ENST00000616864 791 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AL035461.2-201ENST00000619201 524 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 AC135352.1-201ENST00000506173 1418 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 CASC19-206ENST00000641028 1430 ntBASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NEDD8-MDP1E9PL57 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AL359922.3-201ENST00000624779 1670 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 SNORA70.2-201ENST00000364506 135 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 OR13C3-201ENST00000374781 1108 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 UBBP2-201ENST00000376781 231 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AL080315.1-201ENST00000406055 466 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 OR5M12P-201ENST00000423388 929 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 CKS1BP6-201ENST00000424932 240 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 CBX1P1-201ENST00000440184 427 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 CCRL1P1-201ENST00000449542 1053 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 RPL23AP24-201ENST00000458203 385 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 PARP1P2-201ENST00000556806 195 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC007620.3-201ENST00000608131 497 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC084036.1-201ENST00000609190 508 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 AC009704.2-201ENST00000618739 483 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 LINC01808-202ENST00000641680 1116 ntBASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NEDD8-MDP1E9PL57 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 RNA5SP509-201ENST00000364577 119 ntBASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.69□□□□□ -1.66
NEDD8-MDP1E9PL57 AL589655.1-201ENST00000405398 482 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms