Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 VDAC2P3-201ENST00000430995 828 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL627308.1-201ENST00000435693 821 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC006480.1-201ENST00000449887 378 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 BX842559.2-201ENST00000451418 605 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 WBP1LP1-201ENST00000460451 896 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 RPS27AP17-201ENST00000463344 455 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL7P22-201ENST00000466005 733 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 MYL6P4-201ENST00000477911 453 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AP001025.2-201ENST00000490908 477 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NACAP6-201ENST00000509572 622 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 EIF3KP3-201ENST00000514461 639 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 SCARNA6-201ENST00000515982 265 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AP003084.1-201ENST00000524828 742 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 VDAC2P2-201ENST00000544463 901 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 NPM1P42-201ENST00000560329 862 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 FRG2IP-201ENST00000563581 781 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC008687.2-201ENST00000597865 520 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 COX6CP16-201ENST00000603667 216 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL352984.2-201ENST00000611153 546 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 pRNA.9-201ENST00000618609 89 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL356585.4-201ENST00000623078 1229 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AC062029.1-202ENST00000606164 3651 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 AL592429.1-201ENST00000403909 1473 ntBASIC6.79□□□□□ -1.32
PCDHGA11Q9Y5H2 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC100810.3-201ENST00000633189 2240 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 VPS35P1-201ENST00000563400 1518 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU4-81P-201ENST00000363561 144 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-738P-201ENST00000384531 106 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RPS3AP5-201ENST00000389400 821 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RNU6-1158P-201ENST00000391167 107 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 OR4K12P-201ENST00000406538 961 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RPSAP44-201ENST00000406712 884 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RPL35AP24-201ENST00000413846 330 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC008280.1-201ENST00000418851 412 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC119618.1-201ENST00000434191 222 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 PHBP4-201ENST00000437447 837 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AL604028.2-201ENST00000437848 788 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC018475.1-201ENST00000478358 465 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC010587.1-201ENST00000505809 469 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 PCBP2P3-201ENST00000509726 843 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RNA5SP518-201ENST00000515957 119 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 RN7SKP116-201ENST00000516902 319 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 OR7E161P-201ENST00000533722 967 ntBASIC6.78□□□□□ -1.32
PCDHGA11Q9Y5H2 AC023050.3-201ENST00000541142 333 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms