Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC112187.1-201ENST00000455837 479 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 RN7SL352P-201ENST00000466002 277 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 RPS27P23-201ENST00000487608 251 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 RNU6-1225P-201ENST00000516336 65 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC115085.1-201ENST00000588924 229 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC010620.1-201ENST00000601088 1102 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC006363.1-201ENST00000603806 463 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 SUMO2P15-201ENST00000604285 278 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC009090.3-201ENST00000616553 565 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 CU639417.4-201ENST00000623928 207 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC116563.2-201ENST00000624751 535 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC068620.4-201ENST00000636730 1182 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC007671.2-201ENST00000637344 619 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AC068137.4-201ENST00000638485 296 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 AL513185.3-201ENST00000433335 1300 ntBASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PCDHGA3Q9Y5H0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 U3.10-201ENST00000364459 214 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 RNA5SP80-201ENST00000410475 111 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 Z93019.1-201ENST00000416450 973 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC099677.3-201ENST00000427081 395 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL022331.1-201ENST00000429025 477 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL731534.1-201ENST00000434711 269 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC073410.1-201ENST00000435125 589 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC093155.1-201ENST00000440164 826 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 MTND1P29-201ENST00000448112 647 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 RPL23AP40-201ENST00000487630 390 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 EIF3LP3-201ENST00000495197 822 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AP001207.1-201ENST00000524051 481 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL356057.1-201ENST00000533798 831 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 GTF2IP8-201ENST00000560687 584 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC090888.1-201ENST00000561335 1141 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL137072.1-201ENST00000603444 466 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC091488.1-201ENST00000604239 660 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AL390816.3-201ENST00000604527 1066 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC016583.1-201ENST00000624221 2431 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 AC087565.3-203ENST00000641018 837 ntBASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PCDHGA3Q9Y5H0 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms