Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 SNORA64.1-201ENST00000362600 132 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RN7SKP160-201ENST00000363804 340 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RNU6-621P-201ENST00000364752 109 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL590084.2-201ENST00000401481 382 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 GAPDHP42-201ENST00000406848 981 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL133264.1-201ENST00000407157 562 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 USP9YP26-201ENST00000421008 661 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC004074.1-201ENST00000421810 1063 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 NPM1P24-201ENST00000428039 894 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 BX276092.6-201ENST00000430476 250 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 BX276092.8-201ENST00000455722 250 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RPL21P71-201ENST00000465598 459 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC099521.1-201ENST00000482557 334 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RPL23AP40-201ENST00000487630 390 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC008638.1-201ENST00000506035 866 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC109481.1-201ENST00000509173 282 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC097486.1-201ENST00000515331 210 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RNU6-488P-201ENST00000515918 99 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 IGBP1P1-201ENST00000554337 1009 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC093519.1-201ENST00000566109 298 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 MIR4505-201ENST00000582238 73 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 FO393422.1-201ENST00000603908 708 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC145423.1-201ENST00000605712 336 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC004948.1-201ENST00000609858 672 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC097505.1-201ENST00000610199 565 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC122133.1-201ENST00000613964 233 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL139099.4-201ENST00000614802 114 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC015804.1-201ENST00000622935 435 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL359757.1-201ENST00000623176 255 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AL121839.2-201ENST00000565058 6943 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 AP005435.3-201ENST00000531260 3198 ntBASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AL445523.1-201ENST00000451184 1362 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AC109315.1-201ENST00000584143 1347 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AC025125.1-201ENST00000624743 1922 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 RNU6-249P-201ENST00000363016 102 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 RNU6-931P-201ENST00000363850 107 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 RNA5SP394-201ENST00000364216 119 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 SUGT1P1-201ENST00000379514 476 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 RNU1-74P-201ENST00000384108 171 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 SNORD116-1-201ENST00000384335 95 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AL139098.1-201ENST00000407291 389 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 MORF4L1P6-201ENST00000418771 268 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 SKP1P3-201ENST00000429280 487 ntBASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
PCDHGA6Q9Y5G7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms