Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HDAC6Q9UBN7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
HDAC6Q9UBN7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MAPK10-349ENST00000641767 3661 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 STX3-208ENST00000641815 3236 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC126755.2-208ENST00000327792 462 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC138969.1-213ENST00000331436 462 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MIR16-2-201ENST00000362117 81 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 BMS1P3-201ENST00000372011 932 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 SNORA70.10-201ENST00000384515 134 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 RNU6-1257P-201ENST00000384625 110 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 ATP5HP3-201ENST00000396994 486 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC016712.1-201ENST00000431088 378 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MRPL50P1-201ENST00000431951 384 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AL353898.1-201ENST00000444055 238 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 RPL6P5-201ENST00000445678 828 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 OR1H1P-201ENST00000448731 937 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC116562.1-201ENST00000485355 781 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 TPT1P8-201ENST00000510120 555 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MTND1P6-201ENST00000523621 946 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC012339.2-201ENST00000523996 453 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MIR4697-201ENST00000582977 78 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC011453.2-201ENST00000603737 729 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AL159169.2-201ENST00000610061 1269 ntBASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC6Q9UBN7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC017079.1-201ENST00000333650 415 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 UBBP2-201ENST00000376781 231 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AL672167.2-201ENST00000377164 879 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 RNU6-31P-201ENST00000384388 108 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 HMGB1P10-201ENST00000395823 563 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 VN1R37P-201ENST00000419096 748 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC069213.2-201ENST00000420238 366 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 MTCO2P1-201ENST00000424648 477 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AL160175.1-201ENST00000428124 247 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 DNAJC19P7-201ENST00000428811 344 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 RPS29P9-201ENST00000440360 171 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AURKAPS2-201ENST00000454983 333 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 RPL23AP56-201ENST00000460778 453 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 RPL32P14-201ENST00000463196 378 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC011005.3-201ENST00000491624 395 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 IGKV1-32-201ENST00000519290 311 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 C1GALT1P3-201ENST00000522049 819 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC068790.7-201ENST00000602347 528 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC079880.2-201ENST00000603790 1213 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC095038.2-201ENST00000621464 1070 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC006840.1-201ENST00000623069 542 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 AC093875.1-201ENST00000623688 504 ntBASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC6Q9UBN7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms