Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC092162.3-201ENST00000624511 1624 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 BMS1P3-201ENST00000372011 932 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 SNORA40.4-201ENST00000390971 128 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 ATP5F1P6-201ENST00000402768 767 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 U3.35-201ENST00000408405 208 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC073069.1-201ENST00000428657 441 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 ETF1P3-201ENST00000430422 1160 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 MOB1AP2-201ENST00000446060 614 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 OR52J1P-201ENST00000450596 932 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC010733.1-201ENST00000451515 401 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AURKAPS2-201ENST00000454983 333 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 RN7SL329P-201ENST00000467740 299 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC006511.1-201ENST00000470614 315 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC093270.2-201ENST00000486157 792 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC133963.2-201ENST00000513686 578 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 OR5AK3P-201ENST00000527486 1297 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 CR383656.14-201ENST00000551951 406 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 FKBP1BP1-201ENST00000553366 325 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 RN7SL802P-201ENST00000577858 299 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AL121932.1-201ENST00000605542 214 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 OR2BH1P-201ENST00000608850 864 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 CR392039.4-201ENST00000624968 501 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 AC025574.1-201ENST00000554784 1653 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TLK1P1-201ENST00000456760 2440 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 MTCO1P4-201ENST00000520516 1409 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 SAMMSON-226ENST00000642089 1582 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 OR51B3P-201ENST00000412287 913 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AL158050.1-201ENST00000416077 457 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 OR13Z1P-201ENST00000416141 834 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 VN1R37P-201ENST00000419096 748 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 LINC00993-201ENST00000420453 540 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 RPS17P8-201ENST00000434525 335 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 PTMAP3-201ENST00000447474 330 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 SLC25A18P1-201ENST00000449385 454 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 RPL7P16-201ENST00000479738 738 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AL161747.1-201ENST00000480068 358 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 RN7SL214P-201ENST00000487317 265 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 RN7SL591P-201ENST00000496150 292 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC113192.3-201ENST00000529152 742 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AL121594.4-201ENST00000556211 1196 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC087477.6-201ENST00000559595 843 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC009117.1-201ENST00000563948 554 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 OR1F2P-201ENST00000570470 933 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 MIR5699-201ENST00000578903 90 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC022726.1-201ENST00000587475 207 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 AC006946.3-201ENST00000609791 756 ntBASIC5.38□□□□□ -1.55
BLOC1S4Q9NUP1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms