Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC022882.1-201ENST00000532142 501 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 DYNLL1P4-201ENST00000549314 266 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 MTND2P13-201ENST00000577438 1039 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC069061.3-201ENST00000582254 823 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RN7SL52P-201ENST00000584271 284 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AP001160.4-201ENST00000596971 382 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AL161616.1-201ENST00000611867 286 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AL589935.2-201ENST00000616471 1231 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AL138721.1-201ENST00000616756 179 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 MIR7703-201ENST00000620784 77 ntBASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.43□□□□□ -1.7
TREX1Q9NSU2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 RN7SKP216-201ENST00000411050 312 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 RBMY2KP-201ENST00000418221 992 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC019050.1-201ENST00000418508 492 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 MTCO1P51-201ENST00000427672 1060 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC006466.1-201ENST00000438721 289 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 CCDC75P1-201ENST00000469247 791 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 STMN1P2-201ENST00000508435 439 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC015795.1-201ENST00000513669 327 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 HMGB1P19-201ENST00000517578 577 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 IGLV3-26-201ENST00000520756 302 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AP006289.1-201ENST00000538089 277 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC234775.3-201ENST00000564612 656 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC084783.1-201ENST00000565846 910 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 VN1R81P-201ENST00000602085 372 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AL592148.3-201ENST00000608771 2646 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AC022960.2-201ENST00000616300 666 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 AL023881.1-201ENST00000621088 301 ntBASIC4.42□□□□□ -1.7
TREX1Q9NSU2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
TREX1Q9NSU2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC067945.1-201ENST00000342609 618 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 MIR3065-201ENST00000390137 79 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC093719.1-202ENST00000392735 373 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 RPEP3-201ENST00000425462 676 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 BRWD1P3-201ENST00000428816 390 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 NDUFA5P1-201ENST00000433858 341 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AL353597.2-202ENST00000434901 373 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AP000936.3-201ENST00000438127 255 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 EIF4A1P11-201ENST00000451239 222 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 DHFRP3-201ENST00000455595 559 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 OR52A4P-201ENST00000472867 958 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 HMGB3P26-201ENST00000560051 582 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC124068.1-201ENST00000563131 678 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.41□□□□□ -1.7
TREX1Q9NSU2 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 Mico1.1-201ENST00000611698 204 ntBASIC4.41□□□□□ -1.7
TREX1Q9NSU2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms