Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 GCSHP4-201ENST00000538792 439 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AP002373.2-201ENST00000541631 1060 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC087465.1-201ENST00000560574 245 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC109446.2-201ENST00000567872 497 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 MIR4666A-201ENST00000580160 79 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 VN1R84P-201ENST00000593697 235 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC068790.7-201ENST00000602347 528 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC064807.4-201ENST00000607201 407 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 MFSD8-245ENST00000641743 948 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AL442128.2-201ENST00000620246 1824 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VTA1Q9NP79 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 AC005261.4-201ENST00000600047 1385 ntBASIC6.03□□□□□ -1.44
VTA1Q9NP79 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VTA1Q9NP79 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
VTA1Q9NP79 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 Z95114.1-201ENST00000624264 14574 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 FAM133CP-201ENST00000332869 704 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 SNORD113-6-201ENST00000363345 75 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 RNU1-146P-201ENST00000364015 165 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 OR52E6-202ENST00000379946 954 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 SNORD56.6-201ENST00000384569 71 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 MTND2P18-201ENST00000419962 1030 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 RBMY2QP-201ENST00000429799 1147 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 HMGB1P48-201ENST00000446155 598 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC005002.1-201ENST00000447458 540 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC234781.3-201ENST00000452540 973 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 ANKRD26P4-201ENST00000455755 950 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 ATG12P2-201ENST00000456830 416 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC090602.1-201ENST00000469695 252 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 PRDX3P4-201ENST00000470828 747 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC110775.1-201ENST00000513721 462 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC138938.1-201ENST00000515431 782 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 RN7SKP147-201ENST00000517154 244 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 NBEAP1-201ENST00000554452 979 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC011840.5-201ENST00000582125 771 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 MTND3P19-201ENST00000603825 345 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC005252.1-201ENST00000604518 1063 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC093388.1-201ENST00000609166 430 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC084782.3-201ENST00000612282 578 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC108359.1-201ENST00000616451 1211 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 AC017037.3-201ENST00000625016 472 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 PANDAR-201ENST00000629595 1506 ntBASIC6.02□□□□□ -1.45
VTA1Q9NP79 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.02□□□□□ -1.45
VTA1Q9NP79 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VTA1Q9NP79 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC017079.1-201ENST00000333650 415 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 MIR133A2-201ENST00000347538 102 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 IGKV7-3-201ENST00000357453 298 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 NUDT19P3-201ENST00000404698 555 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 SNORA11C-201ENST00000408532 129 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 RPL37P18-201ENST00000411602 243 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC092651.1-201ENST00000426110 312 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC022022.1-201ENST00000430304 178 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC234064.1-201ENST00000436312 247 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 LINC02210-201ENST00000444561 288 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms