Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC245060.6-201ENST00000624350 8420 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RNU6-1059P-201ENST00000363752 98 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RNU6-343P-201ENST00000364709 104 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 MIR215-201ENST00000384858 110 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC097374.1-203ENST00000400783 485 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RN7SKP30-201ENST00000411373 334 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC096920.1-201ENST00000423991 241 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC004866.2-201ENST00000438285 481 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RN7SL145P-201ENST00000469955 296 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 DNM1P34-202ENST00000567850 315 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RN7SL785P-201ENST00000578437 253 ntBASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 RMST-210ENST00000640149 2844 ntTSL 5 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SCAF1Q9H7N4 CASR-201ENST00000490131 4015 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC023886.2-201ENST00000321285 411 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 Y_RNA.398-201ENST00000383952 99 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 Y_RNA.526-201ENST00000384572 110 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 RN7SKP137-201ENST00000411074 307 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 RPS24P8-201ENST00000431490 402 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC079781.1-201ENST00000441505 394 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC073909.1-201ENST00000447112 999 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC046144.1-201ENST00000478559 1853 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AL035404.1-201ENST00000497982 568 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 UTP15-202ENST00000508491 1828 ntTSL 2 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AF186190.1-201ENST00000517470 480 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 MIR6780B-201ENST00000610307 79 ntBASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SCAF1Q9H7N4 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
SCAF1Q9H7N4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 LRRC37A6P-202ENST00000448648 5444 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 RNA5SP219-201ENST00000390940 113 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 AL356432.2-201ENST00000407841 422 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 AC009299.1-201ENST00000429684 717 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 PHB2P1-201ENST00000434943 890 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 AC091179.1-201ENST00000461606 579 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 RPL9P9-202ENST00000466501 579 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 RPL23P10-201ENST00000468780 412 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 AC026979.1-201ENST00000492525 396 ntBASIC11.77□□□□□ -0.53
SCAF1Q9H7N4 Y_RNA.662-201ENST00000516028 97 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms