Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AP001005.3-201ENST00000622049 129 ntBASIC4.81□□□□□ -1.64
NXF3Q9H4D5 MFSD8-242ENST00000641690 4199 ntBASIC4.81□□□□□ -1.64
NXF3Q9H4D5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 NXPH1-205ENST00000602349 1953 ntBASIC4.81□□□□□ -1.64
NXF3Q9H4D5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 AP001642.1-201ENST00000624727 2117 ntBASIC4.81□□□□□ -1.64
NXF3Q9H4D5 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.81□□□□□ -1.64
NXF3Q9H4D5 EIF2AP4-201ENST00000424793 1781 ntBASIC4.81□□□□□ -1.64
NXF3Q9H4D5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 RNA5SP151-201ENST00000365632 117 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 RNU1-63P-201ENST00000383902 164 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL583835.1-201ENST00000399570 407 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 MIR1271-201ENST00000408537 86 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 SETP15-201ENST00000412724 337 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AP002371.1-201ENST00000463604 433 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC098583.1-201ENST00000480875 255 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC041039.1-201ENST00000485656 536 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC138938.1-201ENST00000515431 782 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 RNA5SP497-201ENST00000516081 97 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 RNU6-943P-201ENST00000516960 98 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 KCTD9P6-201ENST00000522306 950 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AP001542.1-201ENST00000591314 200 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 IMMP1LP1-201ENST00000605170 488 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 MIR8069-1-201ENST00000616627 86 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL121890.2-201ENST00000617644 465 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AL445567.2-201ENST00000618935 498 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 MIR8069-2-201ENST00000621412 86 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC015871.5-202ENST00000623252 701 ntBASIC4.8□□□□□ -1.64
NXF3Q9H4D5 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NXF3Q9H4D5 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 RPL23AP26-201ENST00000412728 464 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 NFYAP1-201ENST00000431953 972 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 UBE2V1P3-201ENST00000439651 417 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AL591363.1-201ENST00000450091 483 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 FTH1P2-201ENST00000466086 412 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 RPL23AP37-201ENST00000479658 549 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 RPS4XP18-201ENST00000495480 763 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 RNA5SP446-201ENST00000515955 82 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC090515.3-201ENST00000560431 315 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 SS18L2P2-201ENST00000583960 235 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC079587.1-201ENST00000603846 277 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AC234782.5-201ENST00000617723 324 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 uc_338.13-201ENST00000618243 179 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 AL139254.3-201ENST00000641097 674 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
NXF3Q9H4D5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NXF3Q9H4D5 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms