Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 PPM1AP1-201ENST00000502740 1135 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 ARL4AP1-201ENST00000503220 705 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 IGLV3-26-201ENST00000520756 302 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC068790.7-201ENST00000602347 528 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AL133338.2-201ENST00000604292 736 ntBASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.35□□□□□ -1.55
UPF3BQ9BZI7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 LINC00622-201ENST00000562811 1570 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC017104.4-201ENST00000636283 1592 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 OR4K15-201ENST00000305051 1216 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 VDAC2P1-201ENST00000399358 958 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 OR1F12-201ENST00000402365 945 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 NUTF2P7-201ENST00000453086 375 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 RPS6P2-201ENST00000454208 705 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 RPL7AP28-201ENST00000464513 571 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC090151.1-201ENST00000520784 730 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC021483.2-201ENST00000567415 758 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 MIR3160-1-201ENST00000577972 85 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 BPIFA4P-203ENST00000603168 689 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC093765.1-201ENST00000603758 881 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC020634.1-201ENST00000608701 549 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 MLECP1-201ENST00000615893 709 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 AC023509.5-201ENST00000617434 807 ntBASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
UPF3BQ9BZI7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
UPF3BQ9BZI7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
UPF3BQ9BZI7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
UPF3BQ9BZI7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 HCFC2P1-201ENST00000392864 1592 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC022893.2-201ENST00000564832 3296 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 RNU1-44P-201ENST00000384453 163 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 RN7SKP263-201ENST00000411194 309 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 SETP10-201ENST00000424368 814 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC234779.1-201ENST00000425910 285 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AP001324.1-201ENST00000428553 399 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 RPL23AP43-201ENST00000446445 471 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 AL356218.2-201ENST00000605264 187 ntBASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
UPF3BQ9BZI7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AL049697.2-201ENST00000403708 294 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 RN7SKP247-201ENST00000411094 308 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 RNU2-22P-201ENST00000411266 212 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 CYP4F29P-201ENST00000420685 446 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC044797.1-201ENST00000445744 679 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 RN7SL41P-201ENST00000476144 297 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AP001781.1-201ENST00000530977 207 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC008126.1-201ENST00000549019 480 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 MIR4715-201ENST00000584117 79 ntBASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.32□□□□□ -1.56
UPF3BQ9BZI7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms