Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 RNU6-462P-201ENST00000362659 105 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.187-201ENST00000363918 113 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 RNU6-809P-201ENST00000384461 107 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 RPS4XP8-201ENST00000402039 771 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 RN7SKP59-201ENST00000410520 314 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 SPA17P1-201ENST00000416656 452 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 FO393419.3-201ENST00000428741 282 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AL606489.2-201ENST00000433886 234 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 FAM103A2P-201ENST00000444122 354 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 CALM1P2-201ENST00000452941 448 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC112206.1-201ENST00000468416 477 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC079140.5-201ENST00000507882 310 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC009902.1-201ENST00000519351 183 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 PSMA2P1-201ENST00000526365 646 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 SUB1P2-201ENST00000556401 297 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC026464.5-201ENST00000562497 722 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC073539.2-201ENST00000597113 165 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AL049539.1-201ENST00000611964 459 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC006840.1-201ENST00000623069 542 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC099494.2-201ENST00000623371 978 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 AC231657.1-201ENST00000624313 397 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
COL25A1Q9BXS0 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC129502.1-201ENST00000623261 1654 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 OR1S2-201ENST00000302592 978 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 ENSAP3-201ENST00000312710 333 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC073343.1-201ENST00000328239 651 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RNU6-543P-201ENST00000362576 108 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RNU6-223P-201ENST00000362830 107 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 Y_RNA.489-201ENST00000384410 101 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC068050.1-201ENST00000394891 380 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AL161909.1-201ENST00000397390 712 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AL121834.1-202ENST00000404494 277 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 NENFP1-201ENST00000419476 466 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 SRIP2-201ENST00000428470 166 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC109583.1-201ENST00000432156 268 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 APOOP2-201ENST00000461561 539 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 TRBV1-201ENST00000476502 284 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC012181.1-201ENST00000479895 423 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RN7SL808P-201ENST00000496066 299 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC025164.1-201ENST00000496249 478 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 H3F3AP3-201ENST00000497682 407 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 SNORD60.2-201ENST00000516883 86 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 OR5D15P-201ENST00000531671 942 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 RPA2P1-201ENST00000556557 721 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 HMGN1P30-201ENST00000589286 268 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC006967.3-201ENST00000594086 1093 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC087763.1-201ENST00000603391 286 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AC016727.2-201ENST00000603988 621 ntBASIC6.78□□□□□ -1.32
COL25A1Q9BXS0 AL732618.1-201ENST00000623251 301 ntBASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms