Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MTCYBP36-201ENST00000404146 440 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RNA5SP115-201ENST00000411160 107 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 NME1P1-201ENST00000420914 382 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC093698.1-201ENST00000423843 571 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC002069.1-201ENST00000429649 1159 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 PSMD10P2-201ENST00000432890 672 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RPL5P7-201ENST00000444235 813 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RPL39P6-201ENST00000448289 150 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 NIPA2P5-201ENST00000452282 464 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RPL7P42-201ENST00000481005 679 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RPL12P30-201ENST00000488389 499 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 RPL17P2-201ENST00000491913 451 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 DYNLL1P6-201ENST00000503440 264 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 HMGN1P13-201ENST00000505795 138 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 OR5M14P-201ENST00000506803 618 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC009646.1-201ENST00000510455 318 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 TOMM20P1-201ENST00000534518 427 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC022432.1-201ENST00000595739 310 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL161729.3-201ENST00000603533 673 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC103710.1-201ENST00000610003 901 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL442067.2-201ENST00000614033 363 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC009233.1-201ENST00000616477 371 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL359880.1-201ENST00000621879 266 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC079228.1-201ENST00000624774 1049 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AC112487.2-201ENST00000637950 304 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AL137058.3-201ENST00000624531 3099 ntBASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.24□□□□□ -1.57
SSBP3Q9BWW4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 OR56A4-201ENST00000330728 1209 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 Y_RNA.89-201ENST00000363031 102 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 RNA5SP346-201ENST00000363541 121 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 RNU6-534P-201ENST00000364877 106 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 RNU6-297P-201ENST00000384636 107 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 GCNT1P4-201ENST00000404096 329 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 RNU6-248P-201ENST00000410720 107 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 U3.43-201ENST00000410734 213 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AL035422.1-201ENST00000414193 397 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AL354707.3-201ENST00000427308 331 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AL512649.1-201ENST00000428997 581 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AC005534.2-201ENST00000431047 433 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 VPS25P1-201ENST00000455691 508 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 OR6K1P-201ENST00000456766 971 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 ARPC3P2-201ENST00000457786 533 ntBASIC5.23□□□□□ -1.57
SSBP3Q9BWW4 PMCHL2-203ENST00000457791 237 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms