Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 OR51C1P-201ENST00000608504 942 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AL118522.2-201ENST00000616045 615 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR6837-201ENST00000620884 64 ntBASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.8□□□□□ -1.48
CDK5RAP1Q96SZ6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.578-201ENST00000390903 88 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC005042.1-201ENST00000393397 800 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AL391361.1-201ENST00000405580 489 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 RNU2-16P-201ENST00000410712 136 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092638.1-201ENST00000411966 1275 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 NPM1P4-201ENST00000414095 812 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AL354868.1-201ENST00000417077 482 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092651.1-201ENST00000426110 312 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF114P1-201ENST00000453500 292 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PSAT1P4-201ENST00000466500 526 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 OR2AO1P-201ENST00000476497 403 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC079203.1-201ENST00000487972 404 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SL184P-201ENST00000488308 297 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 SNORA70.11-201ENST00000515987 138 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 SNORA70.13-201ENST00000516116 138 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 SCARNA21.2-201ENST00000516600 166 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MTND4LP24-201ENST00000572277 291 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR4789-201ENST00000577469 82 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC021749.1-201ENST00000604322 607 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 OR2BH1P-201ENST00000608850 864 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC008498.1-201ENST00000613012 531 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC007204.2-201ENST00000615022 616 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 RNA5SP439-201ENST00000617595 124 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR6826-201ENST00000617808 98 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC104985.2-201ENST00000620598 500 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009878.1-201ENST00000621819 340 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC000095.2-202ENST00000637415 154 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC004158.1-201ENST00000564508 4319 ntBASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
CDK5RAP1Q96SZ6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC009962.1-201ENST00000567327 3813 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 KYNUP3-201ENST00000574386 1341 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 NCLP2-201ENST00000416078 1462 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 FAM3C2-201ENST00000312214 681 ntBASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP1Q96SZ6 RNU6-224P-201ENST00000384055 107 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms