Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL442067.2-201ENST00000614033 363 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
IFT140Q96RY7 RNU1-63P-201ENST00000383902 164 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 RNU11-201ENST00000387069 134 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 RPS20P14-201ENST00000412545 360 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 Z74021.1-201ENST00000423610 407 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 RPL23AP81-201ENST00000455252 467 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 MYL12BP2-201ENST00000503948 512 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 IGKV2D-19-201ENST00000523346 262 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 AL360012.1-201ENST00000602813 131 ntBASIC7.11□□□□□ -1.27
IFT140Q96RY7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.11□□□□□ -1.27
IFT140Q96RY7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
IFT140Q96RY7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
IFT140Q96RY7 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
IFT140Q96RY7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
IFT140Q96RY7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 HSFY1P1-201ENST00000423928 1178 ntBASIC7.1□□□□□ -1.27
IFT140Q96RY7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 U6.105-201ENST00000637379 88 ntBASIC7.1□□□□□ -1.27
IFT140Q96RY7 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.1□□□□□ -1.27
IFT140Q96RY7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 OR4A15-201ENST00000314706 1035 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 AC007068.1-201ENST00000396690 844 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 ATP5F1P4-201ENST00000397288 746 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 RN7SKP177-201ENST00000410567 355 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 Z92545.1-201ENST00000411782 234 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 FTH1P25-201ENST00000447665 469 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 PDSS1P2-201ENST00000449397 678 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 RPL35AP15-201ENST00000468042 339 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 AC110792.1-201ENST00000491826 472 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 GMPSP1-201ENST00000514075 579 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 OR2BH1P-201ENST00000608850 864 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.09□□□□□ -1.27
IFT140Q96RY7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
IFT140Q96RY7 AL035425.3-201ENST00000564206 4996 ntBASIC7.09□□□□□ -1.27
IFT140Q96RY7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
IFT140Q96RY7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
IFT140Q96RY7 CASC19-204ENST00000641001 2055 ntBASIC7.09□□□□□ -1.28
IFT140Q96RY7 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 CASC19-206ENST00000641028 1430 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 UBE2Q2P12-201ENST00000414573 204 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 AMMECR1LP1-201ENST00000415152 841 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 TMX2P1-201ENST00000436507 708 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 BTF3P6-201ENST00000448054 499 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 SOD1P3-201ENST00000518682 454 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 AL592436.1-201ENST00000605135 558 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
IFT140Q96RY7 AL049781.1-201ENST00000623195 3585 ntBASIC7.08□□□□□ -1.28
IFT140Q96RY7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
IFT140Q96RY7 DNM1P47-203ENST00000571780 12667 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms