Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ARL4AP1-201ENST00000503220 705 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC012400.1-201ENST00000518452 381 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 COX6B1P6-201ENST00000522347 255 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 OR5AZ1P-201ENST00000527448 943 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 OR5AK3P-201ENST00000527486 1297 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC009597.2-201ENST00000604659 592 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AL450270.1-201ENST00000606160 391 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 CDRT1-208ENST00000630868 794 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 AC009452.1-201ENST00000640823 606 ntBASIC4.91□□□□□ -1.62
VMP1Q96GC9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.91□□□□□ -1.62
VMP1Q96GC9 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VMP1Q96GC9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VMP1Q96GC9 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 MIR105-2-201ENST00000385083 81 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 HNRNPDP2-201ENST00000406475 478 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 MIR1303-201ENST00000408625 86 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ATG4AP1-201ENST00000416893 538 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 RPL36AP10-201ENST00000421785 322 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 FAM204CP-201ENST00000424489 642 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC090018.1-201ENST00000434369 367 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 AL161722.2-201ENST00000434731 981 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ARL5AP2-201ENST00000444698 533 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC005532.2-201ENST00000467154 373 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 RPS18P6-201ENST00000476880 458 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 RPL15P21-201ENST00000495592 567 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 NIFKP7-201ENST00000503365 834 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 SNRPCP2-201ENST00000504370 475 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 RN7SKP46-201ENST00000515942 234 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 RN7SKP82-201ENST00000516786 223 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC022884.2-201ENST00000578535 580 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC011840.5-201ENST00000582125 771 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AC006210.2-201ENST00000367074 1545 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
VMP1Q96GC9 MTND4P21-201ENST00000453886 1357 ntBASIC4.9□□□□□ -1.63
VMP1Q96GC9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VMP1Q96GC9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.89□□□□□ -1.63
VMP1Q96GC9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VMP1Q96GC9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.89□□□□□ -1.63
VMP1Q96GC9 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
VMP1Q96GC9 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
VMP1Q96GC9 AC100871.1-201ENST00000507871 1456 ntBASIC4.89□□□□□ -1.63
VMP1Q96GC9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.89□□□□□ -1.63
VMP1Q96GC9 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VMP1Q96GC9 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VMP1Q96GC9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms