Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 RPL37AP8-201ENST00000494116 276 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 RPS4XP20-201ENST00000505751 772 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 MTATP6P22-201ENST00000507369 598 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC104108.1-201ENST00000509930 412 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 ATP5LP3-201ENST00000514223 304 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PTP4A1Q93096 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 AP005119.2-201ENST00000579735 1105 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 FKBP1AP1-201ENST00000594588 318 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC069304.3-201ENST00000603938 1084 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC010680.3-201ENST00000604215 520 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 MIR6768-201ENST00000610734 72 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AL162574.2-201ENST00000614618 657 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC015914.2-201ENST00000618167 288 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 AC138907.10-201ENST00000623708 983 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 TLK1P1-201ENST00000456760 2440 ntBASIC4.57□□□□□ -1.68
PTP4A1Q93096 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PTP4A1Q93096 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 RNU1-94P-201ENST00000362627 173 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 HMGB3P18-201ENST00000406327 590 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 RN7SKP125-201ENST00000410481 302 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 HMGB3P31-201ENST00000413333 595 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 NPM1P4-201ENST00000414095 812 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 SLC35E1P1-201ENST00000419313 864 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 CFL1P1-202ENST00000432948 411 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC068135.1-201ENST00000446164 246 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 RPS26P41-201ENST00000450370 284 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 RPL7AP28-201ENST00000464513 571 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 RPL7L1P13-201ENST00000511702 739 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 BUD31P1-201ENST00000521828 359 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC074029.1-201ENST00000552531 1044 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC116553.2-201ENST00000564203 463 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC079148.1-201ENST00000565944 819 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 RPSAP73-201ENST00000614820 330 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTP4A1Q93096 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC136428.4-201ENST00000634254 1155 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 MAPK10-286ENST00000641208 8747 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC024341.1-201ENST00000526444 1552 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 AC068446.1-201ENST00000556425 1549 ntBASIC4.56□□□□□ -1.68
PTP4A1Q93096 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
PTP4A1Q93096 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC119744.1-201ENST00000454746 1715 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AC083899.2-201ENST00000423285 1376 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTP4A1Q93096 DCAF13P3-201ENST00000561147 1334 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 RNA5SP27-201ENST00000363839 119 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.55□□□□□ -1.68
PTP4A1Q93096 ATP5F1P2-201ENST00000398143 760 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 AL078604.1-201ENST00000404609 466 ntBASIC4.55□□□□□ -1.68
PTP4A1Q93096 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms