Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ATG4AQ8WYN0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SNORD113-6-201ENST00000363345 75 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 ZNF885P-201ENST00000420174 1098 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 PTP4A1P1-201ENST00000420539 515 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 EI24P4-201ENST00000423683 1078 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 VN1R108P-201ENST00000431580 830 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AL161722.2-201ENST00000434731 981 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CYCSP12-201ENST00000437729 300 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CDC42P1-201ENST00000456658 548 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 RPL7P40-201ENST00000481703 745 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC118282.2-201ENST00000508739 374 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 MRPS33P3-201ENST00000513456 322 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AP006245.2-201ENST00000522004 300 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 MTCO3P15-201ENST00000526563 574 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 MTND2P26-201ENST00000528255 1029 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC126177.5-201ENST00000549599 178 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 SETP1-201ENST00000556014 845 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CYP2C60P-201ENST00000566088 139 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC016839.1-201ENST00000578162 867 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 VN1R83P-201ENST00000595685 445 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 DPRXP5-201ENST00000604662 539 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC012557.2-201ENST00000605919 418 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AP005432.2-201ENST00000608162 586 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 AC068620.4-201ENST00000636730 1182 ntBASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ATG4AQ8WYN0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ATG4AQ8WYN0 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.34□□□□□ -1.56
ATG4AQ8WYN0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.34□□□□□ -1.56
ATG4AQ8WYN0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
ATG4AQ8WYN0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 SEC63P2-201ENST00000503863 1939 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC104446.1-201ENST00000613728 1321 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 SNORD116-1-201ENST00000384335 95 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RNU6-452P-201ENST00000384406 107 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 OR8V1P-201ENST00000395193 873 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RPS27AP11-201ENST00000402798 447 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL590084.1-201ENST00000407885 387 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AL133325.1-201ENST00000421090 382 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 RPL23AP4-201ENST00000427757 463 ntBASIC5.33□□□□□ -1.56
ATG4AQ8WYN0 AC079807.1-201ENST00000429993 481 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms