Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNED1Q8TER0 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SNED1Q8TER0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 MAPK10-372ENST00000641954 3413 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 MIR554-201ENST00000384874 96 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC097374.1-203ENST00000400783 485 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 MRPL50P1-201ENST00000431951 384 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC004938.1-201ENST00000438468 308 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 RPL7L1P8-201ENST00000469911 741 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC111000.5-201ENST00000506559 1178 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 RNA5SP249-201ENST00000516127 99 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 AC010503.3-201ENST00000594355 540 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 MIR7151-201ENST00000617477 60 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 MIR6075-201ENST00000620782 95 ntBASIC5.37□□□□□ -1.55
SNED1Q8TER0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SNED1Q8TER0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SNED1Q8TER0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AL731532.2-201ENST00000623542 1953 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 GVINP1-202ENST00000531871 7271 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 RNA5SP151-201ENST00000365632 117 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 RPL17P50-201ENST00000396131 546 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 AL358178.1-201ENST00000407698 397 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 RN7SKP202-201ENST00000410439 330 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 RNU6-628P-201ENST00000410675 107 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 RPS3AP25-201ENST00000411660 793 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 AL590806.1-201ENST00000415818 853 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 ARAFP1-201ENST00000422172 605 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 VN1R34P-201ENST00000447387 883 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC079804.1-201ENST00000461922 436 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC091959.2-201ENST00000477363 321 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 AC122134.1-202ENST00000569111 1201 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 MIR4286-201ENST00000580651 93 ntBASIC5.36□□□□□ -1.55
SNED1Q8TER0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SNED1Q8TER0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SNED1Q8TER0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNED1Q8TER0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 RNU1-14P-201ENST00000362759 152 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNED1Q8TER0 RN7SKP235-201ENST00000410662 305 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 GTF3AP5-201ENST00000442645 697 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 RPL6P5-201ENST00000445678 828 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC099522.1-202ENST00000514718 367 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 RNA5SP519-201ENST00000516480 119 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC053481.4-201ENST00000583164 216 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 MIR6875-201ENST00000617506 72 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AP003400.2-201ENST00000624036 666 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC009452.1-201ENST00000640823 606 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AC027228.2-201ENST00000567141 2154 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNED1Q8TER0 AL133243.3-201ENST00000617415 3004 ntBASIC5.35□□□□□ -1.55
SNED1Q8TER0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SNED1Q8TER0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.35□□□□□ -1.55
SNED1Q8TER0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 RN7SKP159-201ENST00000410657 292 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AC019070.1-201ENST00000415008 1024 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms