Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC012078.1-201ENST00000405035 1646 ntBASIC5.77□□□□□ -1.48
NUP43Q8NFH3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CASC19-260ENST00000641828 2001 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC137056.2-201ENST00000624055 1958 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 Y_RNA.372-201ENST00000365599 102 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL451142.1-201ENST00000375867 775 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MT-TL1-201ENST00000386347 75 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 FCF1P10-201ENST00000407590 479 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MTND4LP17-201ENST00000414607 293 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC007742.1-201ENST00000425789 329 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 ELOCP26-201ENST00000436067 329 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PPIAP17-201ENST00000438507 471 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL645936.1-201ENST00000441979 518 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC112206.1-201ENST00000468416 477 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL355032.1-201ENST00000472981 438 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 RPL5P12-201ENST00000477071 851 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LARP1BP2-201ENST00000486594 519 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 RPS26P24-201ENST00000497656 331 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC011352.3-201ENST00000505162 593 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PAICSP4-201ENST00000517543 1253 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC127024.5-201ENST00000580085 462 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MIR4271-201ENST00000582451 67 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC092681.3-201ENST00000609463 678 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC131902.3-201ENST00000611767 581 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC005332.6-201ENST00000613178 446 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC126177.8-201ENST00000618339 1015 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MIR6823-201ENST00000622118 61 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MKKS-204ENST00000639674 192 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL591135.1-201ENST00000401578 5914 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AL121768.1-201ENST00000613917 2544 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC005725.1-201ENST00000577346 2607 ntBASIC5.77□□□□□ -1.49
NUP43Q8NFH3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 AC024587.1-201ENST00000505925 2157 ntBASIC5.76□□□□□ -1.49
NUP43Q8NFH3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 RNU6-876P-201ENST00000391295 104 ntBASIC5.76□□□□□ -1.49
NUP43Q8NFH3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.76□□□□□ -1.49
NUP43Q8NFH3 RN7SKP144-201ENST00000411108 279 ntBASIC5.76□□□□□ -1.49
NUP43Q8NFH3 RNA5SP498-201ENST00000411342 120 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms