Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 TOMM20P2-201ENST00000540082 421 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC114878.2-201ENST00000604863 1251 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC064801.1-201ENST00000612025 407 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AC116667.1-201ENST00000604855 2072 ntBASIC6.61□□□□□ -1.35
VPS8Q8N3P4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VPS8Q8N3P4 AL121839.2-201ENST00000565058 6943 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 VN1R8P-201ENST00000407739 893 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 MRPL50P1-201ENST00000431951 384 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 RPL23AP46-201ENST00000438548 490 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 RPL36AP13-201ENST00000457490 317 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AC093824.1-201ENST00000508796 343 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AC027176.2-201ENST00000559166 746 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 VPS35P1-201ENST00000563400 1518 ntBASIC6.6□□□□□ -1.35
VPS8Q8N3P4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS8Q8N3P4 RNA5SP130-201ENST00000364431 114 ntBASIC6.59□□□□□ -1.35
VPS8Q8N3P4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 MTCO1P35-201ENST00000515270 228 ntBASIC6.59□□□□□ -1.35
VPS8Q8N3P4 IGLV3-26-201ENST00000520756 302 ntBASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 RNA5SP196-201ENST00000625967 102 ntBASIC6.59□□□□□ -1.35
VPS8Q8N3P4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.59□□□□□ -1.35
VPS8Q8N3P4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.59□□□□□ -1.35
VPS8Q8N3P4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 RN7SKP74-201ENST00000362849 309 ntBASIC6.59□□□□□ -1.36
VPS8Q8N3P4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 ARAFP2-201ENST00000440565 559 ntBASIC6.59□□□□□ -1.36
VPS8Q8N3P4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 PARP4P3-201ENST00000510265 317 ntBASIC6.59□□□□□ -1.36
VPS8Q8N3P4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.59□□□□□ -1.36
VPS8Q8N3P4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 OR51C1P-201ENST00000608504 942 ntBASIC6.59□□□□□ -1.36
VPS8Q8N3P4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.59□□□□□ -1.36
VPS8Q8N3P4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AP001273.1-201ENST00000624493 3152 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AC092162.3-201ENST00000624511 1624 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AC008079.2-201ENST00000623543 20396 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AC091046.3-201ENST00000631455 1574 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 PPIAP31-201ENST00000405422 495 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 RBMY1KP-201ENST00000423480 476 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 RAD23BP3-201ENST00000454157 1152 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AC021146.3-201ENST00000511911 260 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 SNORA31.9-201ENST00000516429 84 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 MIR5684-201ENST00000585074 65 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 ZYXP1-201ENST00000617638 118 ntBASIC6.58□□□□□ -1.36
VPS8Q8N3P4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
VPS8Q8N3P4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms