Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC100847.1-201ENST00000611316 481 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC004241.3-201ENST00000611728 517 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-368P-201ENST00000620928 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-538P-201ENST00000622329 107 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC019080.5-201ENST00000624891 757 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 HPVC1-201ENST00000629899 1198 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC093591.2-201ENST00000565254 3843 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC126323.6-202ENST00000568092 3511 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 AC125257.1-201ENST00000560400 2930 ntBASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
C9orf40Q8IXQ3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AL592148.3-201ENST00000608771 2646 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RNU4-39P-201ENST00000362455 127 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 EIF4A1P1-201ENST00000420241 934 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC006065.1-201ENST00000422539 802 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC245028.1-201ENST00000423259 256 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC093084.1-201ENST00000424233 687 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 MTND4LP13-201ENST00000425022 298 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RPEP3-201ENST00000425462 676 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RPL23AP1-201ENST00000428990 471 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC007563.3-201ENST00000433233 371 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 CEACAMP9-201ENST00000442990 513 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RPL21P6-201ENST00000479171 504 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC108157.1-201ENST00000510511 539 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AC209154.1-201ENST00000582156 337 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 AL049536.1-201ENST00000625043 744 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 MAPK10-349ENST00000641767 3661 ntBASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
C9orf40Q8IXQ3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC108751.5-201ENST00000492880 1336 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC000123.3-201ENST00000624029 4975 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 OR56B2P-201ENST00000317102 954 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 SNORA56-201ENST00000383966 129 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RPS4XP9-201ENST00000405151 780 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 Z74021.1-201ENST00000423610 407 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL606490.7-201ENST00000433136 191 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 ZFAND6P1-201ENST00000434138 605 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RPL23AP93-201ENST00000440847 484 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL162591.2-201ENST00000449634 317 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RPS6P2-201ENST00000454208 705 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RN7SL459P-201ENST00000481078 302 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC090543.1-201ENST00000492168 485 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AK3P4-201ENST00000504283 583 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms