Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC119674.1-213ENST00000641177 1386 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AP003119.3-201ENST00000566747 4192 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC136624.1-201ENST00000400791 413 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC002524.1-201ENST00000411687 547 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 RPL6P29-201ENST00000414863 865 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 SDCBPP2-201ENST00000424643 885 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 TRIM60P16-201ENST00000444048 694 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 PDSS1P2-201ENST00000449397 678 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 VN1R38P-201ENST00000450265 887 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 ELOCP23-201ENST00000452014 332 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AP000797.1-201ENST00000478870 387 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC138853.1-201ENST00000503549 823 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC021678.1-201ENST00000505195 936 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC114781.3-201ENST00000512083 142 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 IGHV3-32-201ENST00000519182 355 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 OR4A45P-201ENST00000529954 901 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC092121.1-201ENST00000569452 202 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AC079395.2-201ENST00000610982 737 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 AL139089.1-201ENST00000620372 975 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 OR4G11P-202ENST00000642116 1414 ntBASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NPAS4Q8IUM7 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.71□□□□□ -1.33
NPAS4Q8IUM7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 OR4A15-201ENST00000314706 1035 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RNU6-761P-201ENST00000384148 107 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RNU1-149P-201ENST00000390870 161 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 U3.23-201ENST00000391132 200 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 SNRPEP2-201ENST00000397592 279 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC079355.1-201ENST00000421770 223 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RPL12P12-201ENST00000424633 501 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 IPMKP1-201ENST00000425988 855 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 ZYG11AP1-201ENST00000430329 837 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 FTLP8-201ENST00000446770 267 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RANP2-201ENST00000456833 229 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC092757.1-201ENST00000467293 467 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC092865.4-201ENST00000477936 615 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 RN7SL193P-201ENST00000491708 276 ntBASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.71□□□□□ -1.34
NPAS4Q8IUM7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms