Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 SNORA57.3-201ENST00000411095 141 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 VN1R51P-201ENST00000411675 945 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 RPL37P3-201ENST00000456825 293 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC008155.2-201ENST00000464337 397 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 LINC02035-201ENST00000610128 5476 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 AC140113.4-201ENST00000622087 222 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 SNX18P3-202ENST00000565670 1750 ntBASIC3.41□□□□□ -1.86
VPS13CQ709C8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS13CQ709C8 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS13CQ709C8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC021242.1-201ENST00000507315 2035 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 OR6C71P-201ENST00000432580 913 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 AL451050.1-201ENST00000450126 415 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 CDH12P2-201ENST00000504393 298 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 AL360270.2-201ENST00000562952 5985 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 MARK2P15-201ENST00000432204 2186 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC068733.2-201ENST00000605434 1418 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VPS13CQ709C8 TRIM60P17-201ENST00000415181 719 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC005300.1-201ENST00000428401 373 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 RPL7P49-201ENST00000471402 708 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.4□□□□□ -1.86
VPS13CQ709C8 OR5B10P-201ENST00000532869 642 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 AC079880.2-201ENST00000603790 1213 ntBASIC3.4□□□□□ -1.86
VPS13CQ709C8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 FCF1P5-201ENST00000406490 482 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 AC110768.1-201ENST00000509222 400 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 MIR4325-201ENST00000583049 90 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 MIR6868-201ENST00000611215 58 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 AC007546.2-201ENST00000623996 360 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 CASC19-204ENST00000641001 2055 ntBASIC3.4□□□□□ -1.87
VPS13CQ709C8 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS13CQ709C8 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VPS13CQ709C8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 SNORA70.24-201ENST00000517233 118 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 OR9M1P-201ENST00000459641 921 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 RPS29P19-201ENST00000479709 171 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms