Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MRPL42P4-201ENST00000453267 443 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL445669.2-201ENST00000454425 421 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC118758.1-202ENST00000454719 225 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 TPTE2P5-203ENST00000458118 728 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RPS17P15-201ENST00000475609 349 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RPS3AP43-201ENST00000479743 781 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 COX6B1P2-201ENST00000489624 230 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC091435.1-201ENST00000505442 584 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC021678.3-201ENST00000517893 476 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC026826.3-201ENST00000561747 158 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 MIR4311-201ENST00000580794 100 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AL451086.1-201ENST00000605596 223 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC099676.1-201ENST00000608886 657 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 MIR6889-201ENST00000613185 59 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 AC087821.2-201ENST00000637086 450 ntBASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PTCHD4Q6ZW05 MTCO1P6-201ENST00000481192 1384 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC008079.2-201ENST00000623543 20396 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 SMG1P6-201ENST00000532337 2930 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 GAPDHP24-201ENST00000328713 983 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 Y_RNA.192-201ENST00000363977 102 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RNU4-4P-201ENST00000364588 130 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 SNORA62.2-201ENST00000364672 152 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RNA5SP30-201ENST00000365552 115 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RNU6-157P-201ENST00000383957 107 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RSL24D1P4-201ENST00000400938 484 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL009179.1-201ENST00000406085 265 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 HNRNPDP2-201ENST00000406475 478 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 SETP15-201ENST00000412724 337 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LUZP4P1-201ENST00000415420 344 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC006960.1-201ENST00000419980 153 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL365203.2-201ENST00000423444 196 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 NANOGP4-201ENST00000427230 913 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 KCTD9P1-201ENST00000430462 1167 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC009263.1-201ENST00000441193 1239 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RNU7-125P-201ENST00000458760 62 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 RNU7-27P-201ENST00000459281 62 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AP000797.2-201ENST00000475768 606 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC025458.1-201ENST00000506046 166 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 DUTP7-201ENST00000507982 486 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC114781.3-201ENST00000512083 142 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AP002812.4-201ENST00000532139 286 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC092747.2-201ENST00000545069 983 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC005951.1-201ENST00000576706 485 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC127024.5-201ENST00000580085 462 ntBASIC5.04□□□□□ -1.6
PTCHD4Q6ZW05 AC009237.13-201ENST00000603193 276 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms