Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 BNIP3P1-201ENST00000547295 580 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ZNF321P-202ENST00000550843 495 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC025918.2-201ENST00000558683 763 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 MIR4433B-201ENST00000581329 102 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC025588.2-201ENST00000604851 466 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC104985.3-201ENST00000623479 597 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 LINC01739-205ENST00000641890 573 ntBASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZNF549Q6P9A3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC007996.1-201ENST00000620414 2821 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 RNU1-106P-201ENST00000384382 164 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 RAB9AP5-201ENST00000437794 597 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 THAP5P1-201ENST00000439089 262 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 RAB9AP2-201ENST00000443911 597 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC092691.2-201ENST00000461787 803 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 RNA5SP92-201ENST00000516437 110 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 OR7E128P-201ENST00000532736 1024 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AP000916.1-201ENST00000533869 835 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC008147.3-201ENST00000548666 354 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC004825.1-201ENST00000555068 586 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 MTCYBP33-201ENST00000575007 1130 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AL353778.1-201ENST00000603149 408 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC104687.2-201ENST00000604442 342 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 TAS2R6P-201ENST00000605022 826 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC092140.2-201ENST00000618027 521 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC015914.2-201ENST00000618167 288 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC241377.1-201ENST00000619797 406 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC017037.3-201ENST00000625016 472 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 MIR3974-201ENST00000637126 96 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC008432.1-201ENST00000615912 1320 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 AC116158.1-201ENST00000560231 2129 ntBASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
ZNF549Q6P9A3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 SNORA73.1-201ENST00000363107 205 ntBASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 RNU6-252P-201ENST00000363232 107 ntBASIC4.92□□□□□ -1.62
ZNF549Q6P9A3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms