Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HMGB3P31-201ENST00000413333 595 ntBASIC5.12□□□□□ -1.59
HADHAP40939 OR13Z1P-201ENST00000416141 834 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC007394.1-201ENST00000421941 531 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 AC005033.1-201ENST00000428904 813 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.12□□□□□ -1.59
HADHAP40939 RPL7P29-201ENST00000437151 728 ntBASIC5.12□□□□□ -1.59
HADHAP40939 PTMAP6-201ENST00000439110 327 ntBASIC5.12□□□□□ -1.59
HADHAP40939 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 TPT1P1-201ENST00000458495 518 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.12□□□□□ -1.59
HADHAP40939 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 SNRPCP2-201ENST00000504370 475 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 AC147055.3-201ENST00000510547 851 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.12□□□□□ -1.59
HADHAP40939 RN7SKP260-201ENST00000516907 149 ntBASIC5.12□□□□□ -1.59
HADHAP40939 OR5AK3P-201ENST00000527486 1297 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AP000916.1-201ENST00000533869 835 ntBASIC5.12□□□□□ -1.59
HADHAP40939 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.12□□□□□ -1.59
HADHAP40939 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.12□□□□□ -1.59
HADHAP40939 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.12□□□□□ -1.59
HADHAP40939 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.12□□□□□ -1.59
HADHAP40939 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HADHAP40939 AC006116.7-201ENST00000590141 756 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC5.12□□□□□ -1.59
HADHAP40939 PSMA6P4-201ENST00000603247 718 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AL136370.1-201ENST00000608166 691 ntBASIC5.12□□□□□ -1.59
HADHAP40939 AC015914.2-201ENST00000618167 288 ntBASIC5.12□□□□□ -1.59
HADHAP40939 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HADHAP40939 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.12□□□□□ -1.59
HADHAP40939 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HADHAP40939 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HADHAP40939 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HADHAP40939 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.11□□□□□ -1.59
HADHAP40939 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
HADHAP40939 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.11□□□□□ -1.59
HADHAP40939 MAPK10-349ENST00000641767 3661 ntBASIC5.11□□□□□ -1.59
HADHAP40939 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HADHAP40939 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 SNORA2.3-201ENST00000383920 135 ntBASIC5.11□□□□□ -1.59
HADHAP40939 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HADHAP40939 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 AL645927.1-201ENST00000396783 406 ntBASIC5.11□□□□□ -1.59
HADHAP40939 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.11□□□□□ -1.59
HADHAP40939 RN7SKP213-201ENST00000410746 298 ntBASIC5.11□□□□□ -1.59
HADHAP40939 RN7SKP273-201ENST00000411392 314 ntBASIC5.11□□□□□ -1.59
HADHAP40939 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 AC073136.2-201ENST00000417282 849 ntBASIC5.11□□□□□ -1.59
HADHAP40939 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.11□□□□□ -1.59
HADHAP40939 DDX39BP1-205ENST00000422507 192 ntBASIC5.11□□□□□ -1.59
HADHAP40939 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 AL031663.1-201ENST00000437445 219 ntBASIC5.11□□□□□ -1.59
HADHAP40939 CBX1P4-201ENST00000439415 457 ntBASIC5.11□□□□□ -1.59
HADHAP40939 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.11□□□□□ -1.59
HADHAP40939 RPL7AP61-201ENST00000443410 636 ntBASIC5.11□□□□□ -1.59
HADHAP40939 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.11□□□□□ -1.59
HADHAP40939 CEACAMP7-201ENST00000444105 496 ntBASIC5.11□□□□□ -1.59
HADHAP40939 KNOP1P3-201ENST00000446933 426 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 SBDSP1-204ENST00000453858 737 ntBASIC5.11□□□□□ -1.59
HADHAP40939 PPIAP21-201ENST00000464473 501 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC097484.1-201ENST00000471148 389 ntBASIC5.11□□□□□ -1.59
HADHAP40939 RN7SL222P-201ENST00000476452 299 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC231760.1-201ENST00000498002 260 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 HMGB3P16-201ENST00000508037 287 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC010285.3-201ENST00000511668 676 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 AC027104.1-201ENST00000563702 681 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC233702.9-201ENST00000581528 203 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 RN7SL435P-201ENST00000584418 282 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC011447.4-201ENST00000587562 111 ntBASIC5.11□□□□□ -1.59
HADHAP40939 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 AL445528.2-201ENST00000620582 470 ntBASIC5.11□□□□□ -1.59
HADHAP40939 AC068870.2-201ENST00000620635 389 ntBASIC5.11□□□□□ -1.59
HADHAP40939 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.11□□□□□ -1.59
HADHAP40939 AC106858.1-201ENST00000637497 429 ntBASIC5.11□□□□□ -1.59
HADHAP40939 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 AC017007.4-201ENST00000503353 1352 ntBASIC5.11□□□□□ -1.59
HADHAP40939 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HADHAP40939 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 AC083843.3-201ENST00000623679 2186 ntBASIC5.11□□□□□ -1.59
HADHAP40939 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HADHAP40939 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HADHAP40939 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms