Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CLIP1P30622 MIR23B-201ENST00000384832 97 ntBASIC6.84□□□□□ -1.32
CLIP1P30622 RAB9AP4-201ENST00000415230 609 ntBASIC6.84□□□□□ -1.32
CLIP1P30622 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC6.84□□□□□ -1.32
CLIP1P30622 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CLIP1P30622 DEFB109F-201ENST00000491870 277 ntBASIC6.84□□□□□ -1.32
CLIP1P30622 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.84□□□□□ -1.32
CLIP1P30622 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.84□□□□□ -1.32
CLIP1P30622 AC105233.3-201ENST00000531125 744 ntBASIC6.84□□□□□ -1.32
CLIP1P30622 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.84□□□□□ -1.32
CLIP1P30622 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.84□□□□□ -1.32
CLIP1P30622 AC245389.1-201ENST00000605141 529 ntBASIC6.84□□□□□ -1.32
CLIP1P30622 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
CLIP1P30622 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
CLIP1P30622 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP1P30622 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP1P30622 AL359837.1-201ENST00000381357 287 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP1P30622 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.83□□□□□ -1.32
CLIP1P30622 RPL6P29-201ENST00000414863 865 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 OR13Z1P-201ENST00000416141 834 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 AL356095.1-201ENST00000417217 199 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 BMS1P19-201ENST00000433925 393 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 RNA5SP246-201ENST00000458909 119 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 RPL7P22-201ENST00000466005 733 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 AL132838.2-201ENST00000492041 314 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 PPM1AP1-201ENST00000502740 1135 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.83□□□□□ -1.32
CLIP1P30622 RN7SKP46-201ENST00000515942 234 ntBASIC6.83□□□□□ -1.32
CLIP1P30622 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.83□□□□□ -1.32
CLIP1P30622 HYKK-203ENST00000563233 734 ntTSL 2 BASIC6.83□□□□□ -1.32
CLIP1P30622 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.83□□□□□ -1.32
CLIP1P30622 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CLIP1P30622 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CLIP1P30622 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 MIR372-201ENST00000362225 67 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 RNU1-20P-201ENST00000363314 162 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 UBTFL3-201ENST00000418934 1024 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 COX6B1P7-201ENST00000430845 235 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP1P30622 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC6.82□□□□□ -1.32
CLIP1P30622 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.82□□□□□ -1.32
CLIP1P30622 UBTFL6-201ENST00000477929 1024 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AC108022.1-201ENST00000493466 478 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.82□□□□□ -1.32
CLIP1P30622 AC099522.1-202ENST00000514718 367 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AC006064.5-201ENST00000541782 248 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.82□□□□□ -1.32
CLIP1P30622 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.82□□□□□ -1.32
CLIP1P30622 AC034105.4-201ENST00000568304 277 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 SNORD91B-202ENST00000608459 222 ntBASIC6.82□□□□□ -1.32
CLIP1P30622 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CLIP1P30622 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CLIP1P30622 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.82□□□□□ -1.32
CLIP1P30622 AL133243.3-201ENST00000617415 3004 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP1P30622 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP1P30622 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP1P30622 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CLIP1P30622 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CLIP1P30622 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
CLIP1P30622 RNU6-628P-201ENST00000410675 107 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.81□□□□□ -1.32
CLIP1P30622 AL590806.1-201ENST00000415818 853 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.81□□□□□ -1.32
CLIP1P30622 Z95327.1-201ENST00000446082 482 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CLIP1P30622 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.81□□□□□ -1.32
CLIP1P30622 AC006130.2-201ENST00000586202 326 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP1P30622 AC027228.2-201ENST00000567141 2154 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CLIP1P30622 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.81□□□□□ -1.32
CLIP1P30622 AL513548.1-201ENST00000562904 1724 ntBASIC6.81□□□□□ -1.32
CLIP1P30622 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.8□□□□□ -1.32
CLIP1P30622 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
CLIP1P30622 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CLIP1P30622 AC005005.4-201ENST00000623789 16698 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CLIP1P30622 RNA5SP22-201ENST00000365393 109 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.8□□□□□ -1.32
CLIP1P30622 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms