Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 LCOR-201ENST00000286067 4542 ntBASIC7.12□□□□□ -1.27
VARSP26640 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 HDAC1P1-201ENST00000455482 1445 ntBASIC7.12□□□□□ -1.27
VARSP26640 FOLH1B-202ENST00000529567 2145 ntBASIC7.12□□□□□ -1.27
VARSP26640 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 UG0898H09-202ENST00000623646 7040 ntBASIC7.12□□□□□ -1.27
VARSP26640 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 RN7SKP211-201ENST00000363328 315 ntBASIC7.12□□□□□ -1.27
VARSP26640 RN7SKP36-201ENST00000363997 312 ntBASIC7.12□□□□□ -1.27
VARSP26640 Y_RNA.255-201ENST00000364581 97 ntBASIC7.12□□□□□ -1.27
VARSP26640 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 Y_RNA.557-201ENST00000384680 107 ntBASIC7.12□□□□□ -1.27
VARSP26640 BTBD10P2-201ENST00000404779 676 ntBASIC7.12□□□□□ -1.27
VARSP26640 RPS12P24-201ENST00000412619 387 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.12□□□□□ -1.27
VARSP26640 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 PPIL1P1-201ENST00000423936 499 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC019097.1-201ENST00000424783 735 ntBASIC7.12□□□□□ -1.27
VARSP26640 NIP7P1-201ENST00000433227 512 ntBASIC7.12□□□□□ -1.27
VARSP26640 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 AC114755.4-201ENST00000439114 443 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC092809.1-201ENST00000441469 474 ntBASIC7.12□□□□□ -1.27
VARSP26640 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 TREML3P-201ENST00000457327 501 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC015724.1-201ENST00000478577 156 ntBASIC7.12□□□□□ -1.27
VARSP26640 MTCO1P29-201ENST00000496868 288 ntBASIC7.12□□□□□ -1.27
VARSP26640 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 AC107222.1-201ENST00000510899 637 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 HMGB1P41-201ENST00000520234 440 ntBASIC7.12□□□□□ -1.27
VARSP26640 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 AC126177.6-201ENST00000550420 1009 ntBASIC7.12□□□□□ -1.27
VARSP26640 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.12□□□□□ -1.27
VARSP26640 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AC011891.2-201ENST00000604949 397 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC090525.3-201ENST00000605601 189 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.12□□□□□ -1.27
VARSP26640 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AP001521.1-201ENST00000609150 300 ntBASIC7.12□□□□□ -1.27
VARSP26640 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 AC023509.5-201ENST00000617434 807 ntBASIC7.12□□□□□ -1.27
VARSP26640 AC005753.1-201ENST00000623837 618 ntBASIC7.12□□□□□ -1.27
VARSP26640 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VARSP26640 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.12□□□□□ -1.27
VARSP26640 TAB3P1-202ENST00000452645 1634 ntBASIC7.12□□□□□ -1.27
VARSP26640 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.12□□□□□ -1.27
VARSP26640 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
VARSP26640 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VARSP26640 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 ARHGAP42P1-201ENST00000507474 1976 ntBASIC7.11□□□□□ -1.27
VARSP26640 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.11□□□□□ -1.27
VARSP26640 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
VARSP26640 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
VARSP26640 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.11□□□□□ -1.27
VARSP26640 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.11□□□□□ -1.27
VARSP26640 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 Y_RNA.148-201ENST00000363557 117 ntBASIC7.11□□□□□ -1.27
VARSP26640 RNA5SP302-201ENST00000364896 100 ntBASIC7.11□□□□□ -1.27
VARSP26640 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 OR52E6-202ENST00000379946 954 ntBASIC7.11□□□□□ -1.27
VARSP26640 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 AL121834.1-202ENST00000404494 277 ntBASIC7.11□□□□□ -1.27
VARSP26640 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.11□□□□□ -1.27
VARSP26640 AL034379.1-201ENST00000423216 253 ntBASIC7.11□□□□□ -1.27
VARSP26640 AC009362.1-201ENST00000427253 406 ntBASIC7.11□□□□□ -1.27
VARSP26640 AL731892.1-201ENST00000437364 1192 ntBASIC7.11□□□□□ -1.27
VARSP26640 RSU1P2-202ENST00000437884 485 ntBASIC7.11□□□□□ -1.27
VARSP26640 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
VARSP26640 AC104651.2-201ENST00000447549 528 ntBASIC7.11□□□□□ -1.27
VARSP26640 RPS27AP15-201ENST00000447672 466 ntBASIC7.11□□□□□ -1.27
VARSP26640 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.11□□□□□ -1.27
VARSP26640 AL935212.3-201ENST00000450729 284 ntBASIC7.11□□□□□ -1.27
VARSP26640 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms