Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7□□□□□ -1.29
ERCC3P19447 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 AL731532.1-201ENST00000623972 4236 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 RNU6-500P-201ENST00000362349 107 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC3P19447 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC3P19447 Y_RNA.505-201ENST00000384489 102 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 MIR433-201ENST00000384837 93 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 RNU11-201ENST00000387069 134 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 U3.25-201ENST00000391209 220 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 RN7SKP161-201ENST00000411110 305 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 PGBD4P8-201ENST00000412993 562 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC092634.6-201ENST00000418558 192 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 OR6C64P-201ENST00000419708 825 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 MTCO2P34-201ENST00000421994 607 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC3P19447 AP000281.1-201ENST00000444036 316 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC3P19447 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 NPM1P39-201ENST00000449818 867 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 OR52J1P-201ENST00000450596 932 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 RPS15AP1-201ENST00000457423 391 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ERCC3P19447 AC013828.1-201ENST00000481845 158 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC6.99□□□□□ -1.29
ERCC3P19447 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC3P19447 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.99□□□□□ -1.29
ERCC3P19447 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
ERCC3P19447 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
ERCC3P19447 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.99□□□□□ -1.29
ERCC3P19447 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 AL360012.1-201ENST00000602813 131 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 Z95327.3-201ENST00000610385 572 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC022467.1-201ENST00000614738 749 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC096861.1-201ENST00000616652 240 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 AC068792.1-201ENST00000621354 417 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.99□□□□□ -1.29
ERCC3P19447 AL049767.1-202ENST00000637826 242 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
ERCC3P19447 SMG1P7-201ENST00000565246 2704 ntBASIC6.99□□□□□ -1.29
ERCC3P19447 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 KARSP3-201ENST00000571212 1504 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC027088.4-201ENST00000611559 1947 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ERCC3P19447 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ERCC3P19447 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 RNU6-660P-201ENST00000364566 109 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
ERCC3P19447 U3.23-201ENST00000391132 200 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 RNU6-192P-201ENST00000391253 100 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.98□□□□□ -1.29
ERCC3P19447 AP000534.2-201ENST00000412729 568 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 RPS6P23-201ENST00000413224 722 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 RPL35AP3-201ENST00000414680 288 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 MUPP-201ENST00000438111 566 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.98□□□□□ -1.29
ERCC3P19447 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.98□□□□□ -1.29
ERCC3P19447 MTCO1P19-201ENST00000443487 500 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.98□□□□□ -1.29
ERCC3P19447 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.98□□□□□ -1.29
ERCC3P19447 OR52E3P-201ENST00000452083 936 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
ERCC3P19447 GEMIN2P1-201ENST00000454246 752 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 ARPC3P2-201ENST00000457786 533 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AC112206.1-201ENST00000468416 477 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 AL122020.1-201ENST00000472287 459 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 HMGN2P25-201ENST00000486956 268 ntBASIC6.98□□□□□ -1.29
ERCC3P19447 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms