Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SDC1P18827 RNU6-883P-201ENST00000384597 107 ntBASIC4.33□□□□□ -1.72
SDC1P18827 VDAC2P1-201ENST00000399358 958 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
SDC1P18827 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 RAD23BP1-201ENST00000421404 1227 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RPL23AP4-201ENST00000427757 463 ntBASIC4.33□□□□□ -1.72
SDC1P18827 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 RPS15AP29-201ENST00000445539 400 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RPS27AP15-201ENST00000447672 466 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AL627224.1-201ENST00000448334 444 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 HSPE1P22-201ENST00000456856 327 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RPL5P13-201ENST00000462840 709 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AC021087.2-201ENST00000504656 1203 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 AC021146.7-201ENST00000509604 775 ntBASIC4.33□□□□□ -1.72
SDC1P18827 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.33□□□□□ -1.72
SDC1P18827 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AC016550.3-201ENST00000515706 767 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RNU6-889P-201ENST00000517189 103 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 AC018442.3-201ENST00000523025 183 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AP000676.2-201ENST00000529711 301 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.33□□□□□ -1.72
SDC1P18827 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.33□□□□□ -1.72
SDC1P18827 MIR4646-201ENST00000580775 63 ntBASIC4.33□□□□□ -1.72
SDC1P18827 RN7SL753P-201ENST00000581238 290 ntBASIC4.33□□□□□ -1.72
SDC1P18827 MIR4737-201ENST00000583979 81 ntBASIC4.33□□□□□ -1.72
SDC1P18827 BNIP3P32-201ENST00000600015 554 ntBASIC4.33□□□□□ -1.72
SDC1P18827 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.33□□□□□ -1.72
SDC1P18827 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
SDC1P18827 AC021106.3-201ENST00000623925 531 ntBASIC4.33□□□□□ -1.72
SDC1P18827 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.33□□□□□ -1.72
SDC1P18827 OR5AC4P-202ENST00000642086 985 ntBASIC4.33□□□□□ -1.72
SDC1P18827 OR51H2P-202ENST00000641424 3046 ntBASIC4.33□□□□□ -1.72
SDC1P18827 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.33□□□□□ -1.72
SDC1P18827 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.33□□□□□ -1.72
SDC1P18827 AC015813.6-201ENST00000624409 5808 ntBASIC4.33□□□□□ -1.72
SDC1P18827 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SDC1P18827 NXPH1-205ENST00000602349 1953 ntBASIC4.33□□□□□ -1.72
SDC1P18827 AC139769.1-204ENST00000472297 1931 ntBASIC4.33□□□□□ -1.72
SDC1P18827 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.32□□□□□ -1.72
SDC1P18827 AC108467.2-201ENST00000617640 1597 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC017104.4-201ENST00000636283 1592 ntBASIC4.32□□□□□ -1.72
SDC1P18827 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.32□□□□□ -1.72
SDC1P18827 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SDC1P18827 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.32□□□□□ -1.72
SDC1P18827 SNORA71.2-201ENST00000364941 134 ntBASIC4.32□□□□□ -1.72
SDC1P18827 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 RNU6-40P-201ENST00000384254 107 ntBASIC4.32□□□□□ -1.72
SDC1P18827 RNU1-44P-201ENST00000384453 163 ntBASIC4.32□□□□□ -1.72
SDC1P18827 CCNB2P1-201ENST00000399411 1150 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC233289.1-201ENST00000403700 508 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 AL590806.1-201ENST00000415818 853 ntBASIC4.32□□□□□ -1.72
SDC1P18827 RPA2P2-201ENST00000419698 796 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.32□□□□□ -1.72
SDC1P18827 PDSS1P1-201ENST00000422953 1114 ntBASIC4.32□□□□□ -1.72
SDC1P18827 RPL23AP25-201ENST00000430973 463 ntBASIC4.32□□□□□ -1.72
SDC1P18827 CDY14P-201ENST00000431260 1014 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 ZFAND6P1-201ENST00000434138 605 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SDC1P18827 TMX2P1-201ENST00000436507 708 ntBASIC4.32□□□□□ -1.72
SDC1P18827 CDY12P-201ENST00000440679 1015 ntBASIC4.32□□□□□ -1.72
SDC1P18827 CDY13P-201ENST00000445813 1015 ntBASIC4.32□□□□□ -1.72
SDC1P18827 CDY23P-201ENST00000451661 1014 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC091685.2-201ENST00000454924 864 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC012158.1-204ENST00000483430 465 ntBASIC4.32□□□□□ -1.72
SDC1P18827 RPS4XP14-201ENST00000493072 781 ntBASIC4.32□□□□□ -1.72
SDC1P18827 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.32□□□□□ -1.72
SDC1P18827 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
SDC1P18827 MTND2P31-201ENST00000512602 616 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 IGHV3-63-201ENST00000518422 341 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 AC100770.1-201ENST00000532310 322 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 AC018552.1-201ENST00000562099 811 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.32□□□□□ -1.72
SDC1P18827 RN7SL52P-201ENST00000584271 284 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.32□□□□□ -1.72
SDC1P18827 BPIFA4P-203ENST00000603168 689 ntBASIC4.32□□□□□ -1.72
SDC1P18827 AP004372.1-201ENST00000604842 844 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms