Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL359922.3-201ENST00000624779 1670 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
PDGFRAP16234 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDGFRAP16234 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDGFRAP16234 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFRAP16234 ASNSP1-201ENST00000518311 1939 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFRAP16234 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 RNA5SP498-201ENST00000411342 120 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 VN1R37P-201ENST00000419096 748 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC092570.3-201ENST00000420113 693 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC004074.1-201ENST00000421810 1063 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC007559.1-201ENST00000428736 355 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 AL357520.1-201ENST00000441557 453 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC007000.2-201ENST00000442564 487 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 MRPL48P1-201ENST00000445390 636 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 HMGB1P5-202ENST00000451497 985 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.01□□□□□ -1.61
PDGFRAP16234 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFRAP16234 NPM1P6-201ENST00000521088 871 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 PDCD5P1-201ENST00000543528 309 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 RN7SL802P-201ENST00000577858 299 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 MIR5699-201ENST00000578903 90 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC090312.1-201ENST00000580637 348 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 MIR3667-201ENST00000581025 74 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 MIR4737-201ENST00000583979 81 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.01□□□□□ -1.61
PDGFRAP16234 AC005520.3-201ENST00000602874 370 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC133552.5-201ENST00000604266 540 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC004775.1-201ENST00000607389 753 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 AC015804.1-201ENST00000622935 435 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.01□□□□□ -1.61
PDGFRAP16234 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 AC025574.1-201ENST00000554784 1653 ntBASIC5.01□□□□□ -1.61
PDGFRAP16234 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFRAP16234 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDGFRAP16234 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
PDGFRAP16234 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.01□□□□□ -1.61
PDGFRAP16234 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 AC024341.1-201ENST00000526444 1552 ntBASIC5□□□□□ -1.61
PDGFRAP16234 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5□□□□□ -1.61
PDGFRAP16234 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5□□□□□ -1.61
PDGFRAP16234 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PDGFRAP16234 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 RNA5SP87-201ENST00000384155 118 ntBASIC5□□□□□ -1.61
PDGFRAP16234 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
PDGFRAP16234 RNU6-244P-201ENST00000391028 104 ntBASIC5□□□□□ -1.61
PDGFRAP16234 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5□□□□□ -1.61
PDGFRAP16234 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 RNA5SP113-201ENST00000410486 84 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5□□□□□ -1.61
PDGFRAP16234 DPY19L1P2-201ENST00000426647 915 ntBASIC5□□□□□ -1.61
PDGFRAP16234 OR2B7P-201ENST00000429302 934 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5□□□□□ -1.61
PDGFRAP16234 AL353597.2-202ENST00000434901 373 ntBASIC5□□□□□ -1.61
PDGFRAP16234 NMNAT1P2-201ENST00000435192 860 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 NPM1P33-201ENST00000438918 872 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5□□□□□ -1.61
PDGFRAP16234 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5□□□□□ -1.61
PDGFRAP16234 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 OR1H1P-201ENST00000448731 937 ntBASIC5□□□□□ -1.61
PDGFRAP16234 EIF4A1P11-201ENST00000451239 222 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AL354710.1-201ENST00000453641 246 ntBASIC5□□□□□ -1.61
PDGFRAP16234 RPS5P7-201ENST00000456664 608 ntBASIC5□□□□□ -1.61
PDGFRAP16234 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 AC104971.1-201ENST00000495117 578 ntBASIC5□□□□□ -1.61
PDGFRAP16234 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFRAP16234 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5□□□□□ -1.61
PDGFRAP16234 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 AC108471.1-201ENST00000513977 287 ntBASIC5□□□□□ -1.61
PDGFRAP16234 RNU6-1004P-201ENST00000516584 111 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AC103833.1-201ENST00000517442 172 ntBASIC5□□□□□ -1.61
PDGFRAP16234 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5□□□□□ -1.61
PDGFRAP16234 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5□□□□□ -1.61
PDGFRAP16234 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5□□□□□ -1.61
PDGFRAP16234 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms