Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL1P09341 RNU6ATAC21P-201ENST00000408656 126 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC099535.1-201ENST00000408928 371 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 RN7SKP267-201ENST00000410381 285 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 SNORA74C-2-201ENST00000411179 201 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AL591848.1-201ENST00000413092 322 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL1P09341 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 AL121776.1-201ENST00000429337 372 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 PA2G4P6-201ENST00000438325 1197 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC245047.2-201ENST00000441060 530 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AL357520.1-201ENST00000441557 453 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 EEF1A1P1-201ENST00000447052 739 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL1P09341 AL935212.3-201ENST00000450729 284 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 DDX39BP2-208ENST00000453923 258 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC079168.2-201ENST00000453977 416 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 ISCUP1-201ENST00000454451 448 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC006517.1-201ENST00000480485 328 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC140172.1-201ENST00000502928 141 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 IGKV2D-23-201ENST00000518179 286 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC022832.1-201ENST00000530718 645 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AL121839.1-201ENST00000556233 1185 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC020910.3-201ENST00000603701 874 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 Z98200.1-201ENST00000607298 470 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AC004948.1-201ENST00000609858 672 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.4□□□□□ -1.87
CXCL1P09341 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CXCL1P09341 AC074029.4-201ENST00000624796 1859 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.4□□□□□ -1.87
CXCL1P09341 MIR1910-201ENST00000636955 80 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 AL451142.2-201ENST00000429076 2090 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL1P09341 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CXCL1P09341 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CXCL1P09341 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.4□□□□□ -1.87
CXCL1P09341 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 AC103591.2-201ENST00000265259 766 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL1P09341 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.39□□□□□ -1.87
CXCL1P09341 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL1P09341 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.39□□□□□ -1.87
CXCL1P09341 MIR1286-201ENST00000408112 78 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 NPM1P4-201ENST00000414095 812 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 BMS1P13-201ENST00000417301 885 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 OR6K4P-201ENST00000423179 955 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AL365396.1-201ENST00000430854 671 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 RPEP2-201ENST00000432149 701 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AL353597.2-202ENST00000434901 373 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 RHOT1P3-201ENST00000436571 331 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 AL606490.1-201ENST00000452266 765 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.39□□□□□ -1.87
CXCL1P09341 AURKAPS2-201ENST00000454983 333 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 RPS4XP1-201ENST00000482189 787 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 GAPDHP56-201ENST00000506031 988 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.39□□□□□ -1.87
CXCL1P09341 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.39□□□□□ -1.87
CXCL1P09341 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CXCL1P09341 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 HMGB3P26-201ENST00000560051 582 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 NDUFA5P11-201ENST00000567995 343 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 OR1F2P-201ENST00000570470 933 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC068020.1-201ENST00000594215 661 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC005034.4-201ENST00000603612 899 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC090948.2-201ENST00000607363 564 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AL135786.2-201ENST00000608422 615 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC093799.2-201ENST00000610062 578 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC015922.4-201ENST00000612568 690 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC004477.3-201ENST00000614061 590 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 AC019278.1-201ENST00000623516 479 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 ZNRD1ASP-221ENST00000637794 1074 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CXCL1P09341 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.39□□□□□ -1.87
CXCL1P09341 AC095050.2-201ENST00000510748 1458 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL1P09341 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CXCL1P09341 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms