Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SAMMSON-213ENST00000641336 1521 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AL590240.1-201ENST00000334118 313 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RNA5SP307-201ENST00000362863 116 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RN7SKP247-201ENST00000411094 308 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 NANOGP6-201ENST00000429190 847 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 PRELID3BP10-201ENST00000431957 584 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 ELOCP18-201ENST00000434209 337 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 DDX39BP2-208ENST00000453923 258 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 IGLV2-34-201ENST00000490007 283 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 HNRNPKP5-201ENST00000515300 253 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 UBTFL9-201ENST00000534504 1148 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 RN7SL652P-201ENST00000577769 300 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC091042.1-201ENST00000579213 173 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AP005119.2-201ENST00000579735 1105 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AL049539.1-201ENST00000611964 459 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC100827.5-201ENST00000615883 426 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC074276.2-201ENST00000619891 348 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 AC006971.1-201ENST00000407916 4486 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 OR14L1P-202ENST00000641545 3009 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPB1P04440 SDAD1P1-202ENST00000524156 2051 ntBASIC4.01□□□□□ -1.77
HLA-DPB1P04440 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
HLA-DPB1P04440 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DPB1P04440 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
HLA-DPB1P04440 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DPB1P04440 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 AL035419.1-201ENST00000397037 564 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DPB1P04440 RNU2-22P-201ENST00000411266 212 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPB1P04440 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 SETP10-201ENST00000424368 814 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC097523.2-201ENST00000435551 652 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC016831.4-201ENST00000438302 307 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC006466.1-201ENST00000438721 289 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPB1P04440 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DPB1P04440 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DPB1P04440 PHBP17-201ENST00000528576 541 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 OR5D15P-201ENST00000531671 942 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC124068.1-201ENST00000563131 678 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 FAM60CP-201ENST00000591086 664 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 BPIFA4P-203ENST00000603168 689 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC098935.2-201ENST00000604222 466 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DPB1P04440 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 AC007546.2-201ENST00000623996 360 ntBASIC4□□□□□ -1.77
HLA-DPB1P04440 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DPB1P04440 AC139769.1-204ENST00000472297 1931 ntBASIC3.99□□□□□ -1.77
HLA-DPB1P04440 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DPB1P04440 RN7SKP267-201ENST00000410381 285 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms