Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.07□□□□□ -1.76
SPTA1P02549 RNA5SP513-201ENST00000364648 118 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 RPL21P67-201ENST00000402896 478 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AL035696.2-201ENST00000407941 709 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 MRPS21P3-201ENST00000436696 262 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.07□□□□□ -1.76
SPTA1P02549 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.07□□□□□ -1.76
SPTA1P02549 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.07□□□□□ -1.76
SPTA1P02549 AC099669.2-201ENST00000616549 437 ntBASIC4.07□□□□□ -1.76
SPTA1P02549 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.07□□□□□ -1.76
SPTA1P02549 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SPTA1P02549 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SPTA1P02549 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.07□□□□□ -1.76
SPTA1P02549 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 PCNPP4-201ENST00000414817 517 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AP000907.1-201ENST00000428428 510 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC099522.1-202ENST00000514718 367 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC090515.3-201ENST00000560431 315 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AL162574.1-201ENST00000615702 950 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AP001002.2-201ENST00000625137 386 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 AC024560.2-201ENST00000507981 1497 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 AL031119.1-201ENST00000404707 1879 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 KCNMB3P1-202ENST00000493696 3389 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AC135352.1-201ENST00000506173 1418 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 SNRPFP1-201ENST00000414761 252 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 MTND6P5-201ENST00000448266 512 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SPTA1P02549 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 CR392039.5-201ENST00000623201 510 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 AC010608.2-201ENST00000624830 470 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 U3.53-201ENST00000628922 216 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.06□□□□□ -1.76
SPTA1P02549 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 LINC00622-201ENST00000562811 1570 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 ZNF285B-201ENST00000561698 1767 ntBASIC4.06□□□□□ -1.76
SPTA1P02549 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
SPTA1P02549 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SPTA1P02549 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SPTA1P02549 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SPTA1P02549 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 VN1R37P-201ENST00000419096 748 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 HMGN2P31-201ENST00000432430 273 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 AC099670.2-201ENST00000435130 321 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC021193.1-201ENST00000511607 420 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.05□□□□□ -1.76
SPTA1P02549 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC006453.5-201ENST00000636451 619 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 AL117378.2-201ENST00000622916 1337 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SPTA1P02549 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 RN7SKP159-201ENST00000410657 292 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 RN7SKP17-201ENST00000411242 351 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.05□□□□□ -1.76
SPTA1P02549 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.05□□□□□ -1.76
SPTA1P02549 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SPTA1P02549 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC233982.1-201ENST00000451247 436 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 RPL6P9-201ENST00000466502 859 ntBASIC4.05□□□□□ -1.76
SPTA1P02549 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
SPTA1P02549 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms