Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 OR4F13P-202ENST00000560066 2054 ntBASIC5.32□□□□□ -1.56
PROM1O43490 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 RNU1-87P-201ENST00000363727 170 ntBASIC5.32□□□□□ -1.56
PROM1O43490 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 RNU5A-2P-201ENST00000384337 116 ntBASIC5.32□□□□□ -1.56
PROM1O43490 MIR937-201ENST00000401271 86 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL021407.1-201ENST00000404531 386 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AC093155.2-201ENST00000420734 937 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 TNPO1P1-201ENST00000423641 1138 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 YWHAZP2-201ENST00000440317 728 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AP000281.1-201ENST00000444036 316 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 AC007327.1-201ENST00000447461 264 ntBASIC5.32□□□□□ -1.56
PROM1O43490 RPS23P9-201ENST00000448848 438 ntBASIC5.32□□□□□ -1.56
PROM1O43490 NPM1P13-201ENST00000452663 865 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL035407.2-201ENST00000454090 378 ntBASIC5.32□□□□□ -1.56
PROM1O43490 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 ATP5LP5-201ENST00000483050 299 ntBASIC5.32□□□□□ -1.56
PROM1O43490 RPS17P5-201ENST00000498293 408 ntBASIC5.32□□□□□ -1.56
PROM1O43490 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 HPRT1P2-201ENST00000505250 544 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AC113347.3-201ENST00000509113 148 ntBASIC5.32□□□□□ -1.56
PROM1O43490 IMPA1P1-201ENST00000510718 842 ntBASIC5.32□□□□□ -1.56
PROM1O43490 RNU6-759P-201ENST00000516740 103 ntBASIC5.32□□□□□ -1.56
PROM1O43490 RNU6-232P-201ENST00000517144 64 ntBASIC5.32□□□□□ -1.56
PROM1O43490 SNORA43.3-201ENST00000517240 103 ntBASIC5.32□□□□□ -1.56
PROM1O43490 CYCSP22-201ENST00000517555 339 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.32□□□□□ -1.56
PROM1O43490 HIGD1AP18-201ENST00000520730 278 ntBASIC5.32□□□□□ -1.56
PROM1O43490 C1GALT1P3-201ENST00000522049 819 ntBASIC5.32□□□□□ -1.56
PROM1O43490 MTCYBP20-201ENST00000524239 1129 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AC010198.2-201ENST00000550612 259 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.32□□□□□ -1.56
PROM1O43490 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 MIR1273E-201ENST00000581165 102 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.32□□□□□ -1.56
PROM1O43490 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 AC068790.6-201ENST00000602558 258 ntBASIC5.32□□□□□ -1.56
PROM1O43490 AC211433.2-201ENST00000608433 387 ntBASIC5.32□□□□□ -1.56
PROM1O43490 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 SRRM1P3-201ENST00000426911 2678 ntBASIC5.32□□□□□ -1.56
PROM1O43490 MAPK10-338ENST00000641647 3362 ntBASIC5.32□□□□□ -1.56
PROM1O43490 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
PROM1O43490 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PROM1O43490 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 AC073055.1-201ENST00000456901 1621 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC068870.1-201ENST00000563737 2455 ntBASIC5.31□□□□□ -1.56
PROM1O43490 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PROM1O43490 SETP15-201ENST00000412724 337 ntBASIC5.31□□□□□ -1.56
PROM1O43490 HMGB3P31-201ENST00000413333 595 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.31□□□□□ -1.56
PROM1O43490 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.31□□□□□ -1.56
PROM1O43490 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 AC006960.1-201ENST00000419980 153 ntBASIC5.31□□□□□ -1.56
PROM1O43490 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 RPL34P3-201ENST00000421454 338 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AL662874.1-201ENST00000426065 230 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AL593851.1-201ENST00000426171 157 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.31□□□□□ -1.56
PROM1O43490 AC022022.1-201ENST00000430304 178 ntBASIC5.31□□□□□ -1.56
PROM1O43490 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.31□□□□□ -1.56
PROM1O43490 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.31□□□□□ -1.56
PROM1O43490 AC006335.2-201ENST00000437993 330 ntBASIC5.31□□□□□ -1.56
PROM1O43490 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms