Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 EI24P3-201ENST00000399046 1062 ntBASIC5.5□□□□□ -1.53
RGPD3A6NKT7 ZNF402P-201ENST00000404435 3100 ntBASIC5.5□□□□□ -1.53
RGPD3A6NKT7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 RN7SKP141-201ENST00000516167 338 ntBASIC5.5□□□□□ -1.53
RGPD3A6NKT7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RGPD3A6NKT7 AC008833.1-201ENST00000611633 691 ntBASIC5.5□□□□□ -1.53
RGPD3A6NKT7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 MIR218-2-201ENST00000385006 110 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC007068.1-201ENST00000396690 844 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 EIF4HP2-201ENST00000424380 563 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 RHEBP2-201ENST00000450289 600 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 ACTR3P3-201ENST00000480448 893 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC026427.2-201ENST00000506228 536 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 HSPE1P5-201ENST00000561489 272 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 AC093591.2-201ENST00000565254 3843 ntBASIC5.49□□□□□ -1.53
RGPD3A6NKT7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
RGPD3A6NKT7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 AL590704.1-201ENST00000402856 794 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 RN7SKP156-201ENST00000410308 342 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 RPS20P21-201ENST00000466859 343 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 RNA5SP230-201ENST00000517039 122 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 AC037471.2-201ENST00000564941 598 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 AP000648.2-201ENST00000624182 404 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 FRG1EP-201ENST00000634469 770 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 U6.105-201ENST00000637379 88 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 ZNF285B-201ENST00000561698 1767 ntBASIC5.48□□□□□ -1.53
RGPD3A6NKT7 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.48□□□□□ -1.53
RGPD3A6NKT7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RNU1-83P-201ENST00000363426 164 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 HSFY1P1-201ENST00000423928 1178 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 RPL21P91-201ENST00000429231 479 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 UBE2V1P3-201ENST00000439651 417 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC110792.1-201ENST00000491826 472 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC127024.5-201ENST00000580085 462 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC005412.1-201ENST00000580812 1049 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 ADAD1P2-201ENST00000588476 646 ntBASIC5.47□□□□□ -1.53
RGPD3A6NKT7 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RGPD3A6NKT7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms